Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MMP3P08254 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.27■□□□□ 0.99
MMP3P08254 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.27■□□□□ 0.99
MMP3P08254 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.27■□□□□ 0.99
MMP3P08254 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.27■□□□□ 0.99
MMP3P08254 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP3P08254 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP3P08254 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 KRT18P56-201ENST00000507275 550 ntBASIC21.26■□□□□ 0.99
MMP3P08254 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MMP3P08254 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP3P08254 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP3P08254 AL136038.3-201ENST00000561909 1096 ntBASIC21.26■□□□□ 0.99
MMP3P08254 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP3P08254 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP3P08254 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP3P08254 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP3P08254 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.25■□□□□ 0.99
MMP3P08254 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MMP3P08254 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 VENTXP5-201ENST00000523979 775 ntBASIC21.25■□□□□ 0.99
MMP3P08254 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP3P08254 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
MMP3P08254 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
MMP3P08254 AC093458.2-201ENST00000623150 629 ntBASIC21.25■□□□□ 0.99
MMP3P08254 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP3P08254 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP3P08254 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP3P08254 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.24■□□□□ 0.99
MMP3P08254 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.24■□□□□ 0.99
MMP3P08254 ZNF444P1-201ENST00000559497 298 ntBASIC21.24■□□□□ 0.99
MMP3P08254 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
MMP3P08254 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP3P08254 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP3P08254 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP3P08254 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP3P08254 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
MMP3P08254 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
MMP3P08254 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.23■□□□□ 0.99
MMP3P08254 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP3P08254 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP3P08254 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 GPAT2P1-201ENST00000444924 1672 ntBASIC21.23■□□□□ 0.99
MMP3P08254 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MMP3P08254 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP3P08254 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.22■□□□□ 0.99
MMP3P08254 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
MMP3P08254 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP3P08254 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP3P08254 LINC01311-201ENST00000565162 1445 ntBASIC21.22■□□□□ 0.99
MMP3P08254 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP3P08254 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP3P08254 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.22■□□□□ 0.99
MMP3P08254 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms