Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.31■□□□□ 0.84
RB1P06400 AC026310.3-201ENST00000625186 2373 ntBASIC20.31■□□□□ 0.84
RB1P06400 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RB1P06400 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RB1P06400 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RB1P06400 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.3■□□□□ 0.84
RB1P06400 AP002383.4-201ENST00000442518 975 ntBASIC20.3■□□□□ 0.84
RB1P06400 KRT8P26-201ENST00000534154 1276 ntBASIC20.3■□□□□ 0.84
RB1P06400 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.3■□□□□ 0.84
RB1P06400 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RB1P06400 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.3■□□□□ 0.84
RB1P06400 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RB1P06400 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
RB1P06400 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RB1P06400 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.29■□□□□ 0.84
RB1P06400 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.29■□□□□ 0.84
RB1P06400 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.29■□□□□ 0.84
RB1P06400 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.29■□□□□ 0.84
RB1P06400 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RB1P06400 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.29■□□□□ 0.84
RB1P06400 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RB1P06400 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RB1P06400 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RB1P06400 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RB1P06400 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.28■□□□□ 0.84
RB1P06400 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 UNC93B7-201ENST00000509439 705 ntBASIC20.28■□□□□ 0.84
RB1P06400 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.28■□□□□ 0.84
RB1P06400 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RB1P06400 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.28■□□□□ 0.84
RB1P06400 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.28■□□□□ 0.84
RB1P06400 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.28■□□□□ 0.84
RB1P06400 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RB1P06400 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.28■□□□□ 0.84
RB1P06400 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RB1P06400 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RB1P06400 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.27■□□□□ 0.84
RB1P06400 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.27■□□□□ 0.84
RB1P06400 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.27■□□□□ 0.84
RB1P06400 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.27■□□□□ 0.84
RB1P06400 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RB1P06400 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RB1P06400 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms