Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST1O76090 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 AC116562.4-201ENST00000641316 2276 ntBASIC20.18■□□□□ 0.82
BEST1O76090 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST1O76090 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
BEST1O76090 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BEST1O76090 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.18■□□□□ 0.82
BEST1O76090 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.17■□□□□ 0.82
BEST1O76090 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BEST1O76090 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.17■□□□□ 0.82
BEST1O76090 AC145285.6-201ENST00000604632 637 ntBASIC20.17■□□□□ 0.82
BEST1O76090 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BEST1O76090 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.17■□□□□ 0.82
BEST1O76090 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST1O76090 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
BEST1O76090 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.16■□□□□ 0.82
BEST1O76090 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST1O76090 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.16■□□□□ 0.82
BEST1O76090 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST1O76090 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 LINC01568-207ENST00000641790 1380 ntBASIC20.16■□□□□ 0.82
BEST1O76090 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST1O76090 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST1O76090 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BEST1O76090 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST1O76090 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST1O76090 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.15■□□□□ 0.82
BEST1O76090 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
BEST1O76090 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
BEST1O76090 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST1O76090 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.15■□□□□ 0.82
BEST1O76090 PRSS44-201ENST00000515154 1146 ntBASIC20.15■□□□□ 0.82
BEST1O76090 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.15■□□□□ 0.82
BEST1O76090 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
BEST1O76090 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
BEST1O76090 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
BEST1O76090 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BEST1O76090 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
BEST1O76090 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BEST1O76090 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
BEST1O76090 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BEST1O76090 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.14■□□□□ 0.81
BEST1O76090 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.14■□□□□ 0.81
BEST1O76090 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.14■□□□□ 0.81
BEST1O76090 TSPY14P-201ENST00000303979 915 ntBASIC20.14■□□□□ 0.81
BEST1O76090 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 TSPY21P-201ENST00000433481 731 ntBASIC20.14■□□□□ 0.81
BEST1O76090 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.14■□□□□ 0.81
BEST1O76090 C2orf69P3-201ENST00000565542 1120 ntBASIC20.14■□□□□ 0.81
BEST1O76090 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.14■□□□□ 0.81
BEST1O76090 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
BEST1O76090 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BEST1O76090 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
BEST1O76090 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
BEST1O76090 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
BEST1O76090 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms