Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NOBOXO60393 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NOBOXO60393 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NOBOXO60393 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.99■□□□□ 0.63
NOBOXO60393 AP005242.2-201ENST00000580065 1175 ntBASIC18.99■□□□□ 0.63
NOBOXO60393 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.99■□□□□ 0.63
NOBOXO60393 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.99■□□□□ 0.63
NOBOXO60393 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 AC005363.2-201ENST00000618631 242 ntBASIC18.99■□□□□ 0.63
NOBOXO60393 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOBOXO60393 AL158211.5-201ENST00000623583 2518 ntBASIC18.99■□□□□ 0.63
NOBOXO60393 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.98■□□□□ 0.63
NOBOXO60393 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AP001271.2-201ENST00000624018 1556 ntBASIC18.98■□□□□ 0.63
NOBOXO60393 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.98■□□□□ 0.63
NOBOXO60393 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NOBOXO60393 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
NOBOXO60393 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.98■□□□□ 0.63
NOBOXO60393 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.98■□□□□ 0.63
NOBOXO60393 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.98■□□□□ 0.63
NOBOXO60393 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NOBOXO60393 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.98■□□□□ 0.63
NOBOXO60393 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.98■□□□□ 0.63
NOBOXO60393 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 AC092865.7-201ENST00000641832 219 ntBASIC18.98■□□□□ 0.63
NOBOXO60393 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.98■□□□□ 0.63
NOBOXO60393 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.98■□□□□ 0.63
NOBOXO60393 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 AC125437.2-201ENST00000625180 2167 ntBASIC18.98■□□□□ 0.63
NOBOXO60393 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NOBOXO60393 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.97■□□□□ 0.63
NOBOXO60393 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 ARMC10P1-201ENST00000313754 855 ntBASIC18.97■□□□□ 0.63
NOBOXO60393 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.97■□□□□ 0.63
NOBOXO60393 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.97■□□□□ 0.63
NOBOXO60393 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.97■□□□□ 0.63
NOBOXO60393 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.97■□□□□ 0.63
NOBOXO60393 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
NOBOXO60393 AC130371.2-201ENST00000619443 611 ntBASIC18.97■□□□□ 0.63
NOBOXO60393 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.97■□□□□ 0.63
NOBOXO60393 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.97■□□□□ 0.63
NOBOXO60393 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 KRT8P8-201ENST00000434750 1448 ntBASIC18.97■□□□□ 0.63
NOBOXO60393 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.97■□□□□ 0.63
NOBOXO60393 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NOBOXO60393 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOBOXO60393 RCC2P6-201ENST00000526625 1557 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms