Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP2A1O14983 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.97■■□□□ 1.11
ATP2A1O14983 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 NEK4P2-201ENST00000580004 1012 ntBASIC21.97■■□□□ 1.11
ATP2A1O14983 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.97■■□□□ 1.11
ATP2A1O14983 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.97■■□□□ 1.11
ATP2A1O14983 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ATP2A1O14983 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP2A1O14983 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP2A1O14983 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.96■■□□□ 1.11
ATP2A1O14983 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.96■■□□□ 1.11
ATP2A1O14983 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 AP000523.1-201ENST00000398242 1049 ntBASIC21.96■■□□□ 1.11
ATP2A1O14983 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 TSPY21P-201ENST00000433481 731 ntBASIC21.96■■□□□ 1.11
ATP2A1O14983 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.96■■□□□ 1.11
ATP2A1O14983 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.96■■□□□ 1.11
ATP2A1O14983 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ATP2A1O14983 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
ATP2A1O14983 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ATP2A1O14983 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP2A1O14983 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.11
ATP2A1O14983 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
ATP2A1O14983 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ATP2A1O14983 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 TSPY23P-201ENST00000440136 739 ntBASIC21.95■■□□□ 1.1
ATP2A1O14983 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP2A1O14983 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.95■■□□□ 1.1
ATP2A1O14983 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP2A1O14983 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.95■■□□□ 1.1
ATP2A1O14983 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.95■■□□□ 1.1
ATP2A1O14983 AC140113.3-201ENST00000605663 199 ntBASIC21.95■■□□□ 1.1
ATP2A1O14983 AL023973.1-201ENST00000624619 620 ntBASIC21.95■■□□□ 1.1
ATP2A1O14983 AL121956.5-201ENST00000625261 221 ntBASIC21.95■■□□□ 1.1
ATP2A1O14983 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP2A1O14983 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP2A1O14983 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP2A1O14983 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.94■■□□□ 1.1
ATP2A1O14983 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ATP2A1O14983 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
ATP2A1O14983 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP2A1O14983 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.94■■□□□ 1.1
ATP2A1O14983 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms