Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1O14646 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CHD1O14646 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1O14646 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1O14646 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC31.17■■■□□ 2.58
CHD1O14646 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CHD1O14646 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1O14646 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1O14646 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 MIR564-202ENST00000385049 94 ntBASIC31.16■■■□□ 2.58
CHD1O14646 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC31.16■■■□□ 2.58
CHD1O14646 FAM197Y8-203ENST00000450145 560 ntBASIC31.16■■■□□ 2.58
CHD1O14646 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
CHD1O14646 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC31.16■■■□□ 2.58
CHD1O14646 AC064862.7-201ENST00000604520 867 ntBASIC31.16■■■□□ 2.58
CHD1O14646 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.16■■■□□ 2.58
CHD1O14646 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1O14646 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1O14646 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1O14646 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1O14646 ERF-202ENST00000440177 2032 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1O14646 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1O14646 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1O14646 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC31.15■■■□□ 2.58
CHD1O14646 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC31.15■■■□□ 2.58
CHD1O14646 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1O14646 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CHD1O14646 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1O14646 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1O14646 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC31.14■■■□□ 2.58
CHD1O14646 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD1O14646 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD1O14646 AC098831.1-202ENST00000438821 336 ntBASIC31.14■■■□□ 2.58
CHD1O14646 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHD1O14646 AC091607.1-201ENST00000490318 1060 ntBASIC31.14■■■□□ 2.58
CHD1O14646 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC31.14■■■□□ 2.58
CHD1O14646 GPR32P1-201ENST00000601788 811 ntBASIC31.14■■■□□ 2.58
CHD1O14646 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CHD1O14646 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD1O14646 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CHD1O14646 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.13■■■□□ 2.57
CHD1O14646 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC31.13■■■□□ 2.57
CHD1O14646 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
CHD1O14646 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC31.13■■■□□ 2.57
CHD1O14646 MIR3180-5-201ENST00000583743 153 ntBASIC31.13■■■□□ 2.57
CHD1O14646 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHD1O14646 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC31.13■■■□□ 2.57
CHD1O14646 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 PIN1-206ENST00000587625 878 ntTSL 2 BASIC31.12■■■□□ 2.57
CHD1O14646 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC31.12■■■□□ 2.57
CHD1O14646 AL049840.3-201ENST00000602669 611 ntBASIC31.12■■■□□ 2.57
CHD1O14646 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.12■■■□□ 2.57
CHD1O14646 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 EMD-201ENST00000369835 966 ntTSL 3 BASIC31.12■■■□□ 2.57
CHD1O14646 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC31.12■■■□□ 2.57
CHD1O14646 URGCP-206ENST00000446958 365 ntTSL 2 BASIC31.12■■■□□ 2.57
CHD1O14646 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC31.12■■■□□ 2.57
CHD1O14646 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CHD1O14646 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1O14646 MOK-225ENST00000522867 1883 ntTSL 5 BASIC31.12■■■□□ 2.57
CHD1O14646 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.12■■■□□ 2.57
CHD1O14646 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC31.11■■■□□ 2.57
CHD1O14646 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
CHD1O14646 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC31.11■■■□□ 2.57
CHD1O14646 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC31.11■■■□□ 2.57
CHD1O14646 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CHD1O14646 AC145285.3-201ENST00000564603 959 ntBASIC31.11■■■□□ 2.57
CHD1O14646 LITAF-211ENST00000572255 516 ntTSL 4 BASIC31.11■■■□□ 2.57
CHD1O14646 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CHD1O14646 AC090616.6-201ENST00000582640 721 ntBASIC31.11■■■□□ 2.57
CHD1O14646 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1O14646 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
CHD1O14646 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1O14646 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms