Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF223E7ERA6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF223E7ERA6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RNF223E7ERA6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF223E7ERA6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RNF223E7ERA6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 AC026310.3-201ENST00000625186 2373 ntBASIC15.92■□□□□ 0.14
RNF223E7ERA6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 PRELID1P1-202ENST00000567272 903 ntBASIC15.92■□□□□ 0.14
RNF223E7ERA6 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.92■□□□□ 0.14
RNF223E7ERA6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF223E7ERA6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RNF223E7ERA6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 MIR3652-201ENST00000579335 131 ntBASIC15.91■□□□□ 0.14
RNF223E7ERA6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF223E7ERA6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF223E7ERA6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 TSPY21P-201ENST00000433481 731 ntBASIC15.9■□□□□ 0.14
RNF223E7ERA6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 TSPY23P-201ENST00000440136 739 ntBASIC15.9■□□□□ 0.14
RNF223E7ERA6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF223E7ERA6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF223E7ERA6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RNF223E7ERA6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AL645929.1-201ENST00000420084 975 ntBASIC15.89■□□□□ 0.13
RNF223E7ERA6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF223E7ERA6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF223E7ERA6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms