Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
LOC285556D6RIA3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.01■■□□□ 1.11
LOC285556D6RIA3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LOC285556D6RIA3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LOC285556D6RIA3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.01■■□□□ 1.11
LOC285556D6RIA3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22■■□□□ 1.11
LOC285556D6RIA3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22■■□□□ 1.11
LOC285556D6RIA3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22■■□□□ 1.11
LOC285556D6RIA3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22■■□□□ 1.11
LOC285556D6RIA3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22■■□□□ 1.11
LOC285556D6RIA3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22■■□□□ 1.11
LOC285556D6RIA3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LOC285556D6RIA3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22■■□□□ 1.11
LOC285556D6RIA3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.99■■□□□ 1.11
LOC285556D6RIA3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 AC026396.1-201ENST00000419388 421 ntBASIC21.99■■□□□ 1.11
LOC285556D6RIA3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 MIR3180-5-201ENST00000583743 153 ntBASIC21.99■■□□□ 1.11
LOC285556D6RIA3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LOC285556D6RIA3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 SDHAP1-207ENST00000440850 2000 ntBASIC21.98■■□□□ 1.11
LOC285556D6RIA3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LOC285556D6RIA3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 HLA-F-220ENST00000434407 884 ntBASIC21.97■■□□□ 1.11
LOC285556D6RIA3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AC111152.3-201ENST00000569699 673 ntBASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 IFNL4P1-201ENST00000607083 540 ntBASIC21.97■■□□□ 1.11
LOC285556D6RIA3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AC246785.2-201ENST00000432512 513 ntBASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 PRELID1P1-202ENST00000567272 903 ntBASIC21.97■■□□□ 1.11
LOC285556D6RIA3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LOC285556D6RIA3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LOC285556D6RIA3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LOC285556D6RIA3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.96■■□□□ 1.11
LOC285556D6RIA3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LOC285556D6RIA3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms