Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 AC093525.10-201ENST00000625130 1569 ntBASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC163A0A0D9SF12 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 CHCHD2P8-201ENST00000429873 447 ntBASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 PVRIG2P-201ENST00000435460 978 ntBASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 UNC93B7-201ENST00000509439 705 ntBASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 AP002414.4-201ENST00000589764 1148 ntBASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC163A0A0D9SF12 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 AL162741.1-201ENST00000565563 1558 ntBASIC18.98■□□□□ 0.63
CCDC163A0A0D9SF12 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 TSPY19P-201ENST00000418461 509 ntBASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 HLA-F-220ENST00000434407 884 ntBASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 TSPY18P-201ENST00000441642 509 ntBASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC163A0A0D9SF12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms