Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 KRT18P61-201ENST00000585825 1298 ntBASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV18A0A075B6X5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 PKD1P1-201ENST00000458669 6805 ntBASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV18A0A075B6X5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 AL512353.2-201ENST00000448759 1962 ntBASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV18A0A075B6X5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 IRX1P1-201ENST00000438849 1838 ntBASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 AC005837.3-201ENST00000612163 286 ntBASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 AC116351.2-201ENST00000606540 1585 ntBASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 NOC2LP1-202ENST00000452600 2235 ntBASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV18A0A075B6X5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms