Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC097372.5-201ENST00000623665 376 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 DOCK11P1-201ENST00000553480 5932 ntBASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CCDC61Q9Y6R9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 U3.7-201ENST00000363668 216 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RNU6-946P-201ENST00000383878 107 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 SPTLC1P2-201ENST00000407089 121 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 MIR1286-201ENST00000408112 78 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 AL591704.1-201ENST00000432574 275 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RN7SL570P-201ENST00000484405 292 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RN7SL547P-201ENST00000490793 290 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 AC022133.1-201ENST00000490961 571 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 Y_RNA.679-201ENST00000516416 91 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RNU2-31P-201ENST00000516954 155 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 AL133271.1-201ENST00000538229 291 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 Y_RNA.772-201ENST00000606692 102 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 FP236240.3-201ENST00000623061 327 ntBASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
CCDC61Q9Y6R9 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 SAMMSON-226ENST00000642089 1582 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 RNU6-1130P-201ENST00000365434 107 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 RNU4-34P-201ENST00000410431 124 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 CBX1P3-201ENST00000413296 527 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC098583.1-201ENST00000480875 255 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 RPL30P10-201ENST00000488148 337 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 SRI-210ENST00000490437 570 ntTSL 2 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 MIR2117-201ENST00000516780 80 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC112693.2-201ENST00000556538 232 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC233702.2-202ENST00000562547 291 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC006254.2-201ENST00000603259 279 ntBASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CCDC61Q9Y6R9 AC025470.1-201ENST00000510053 2032 ntBASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 AC100821.1-201ENST00000523153 2479 ntBASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CCDC61Q9Y6R9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.480-201ENST00000384364 102 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.533-201ENST00000384596 114 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AL139039.1-201ENST00000401900 692 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 U3.42-201ENST00000408746 214 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AC096921.1-201ENST00000411661 375 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 HMGA1P8-201ENST00000414130 321 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AC015977.1-201ENST00000418887 292 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms