Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KLRA1P-201ENST00000503499 986 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 MTCO2P4-201ENST00000517968 247 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AP003730.1-201ENST00000524605 285 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AP004247.1-201ENST00000531556 1289 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 BNIP3P5-201ENST00000562290 498 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AL356055.1-201ENST00000602528 446 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC105429.2-201ENST00000610567 517 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AL158163.1-201ENST00000603915 1649 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 NOL8P1-201ENST00000508336 3529 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 OR4G11P-202ENST00000642116 1414 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 XIAPP3-201ENST00000312918 795 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-251P-201ENST00000363235 104 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 FGF7P8-201ENST00000402994 292 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RNU2-28P-201ENST00000410457 189 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RPS3AP3-201ENST00000411933 242 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC016831.2-201ENST00000417179 352 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 USP12PX-201ENST00000432383 1057 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RPL23AP52-201ENST00000439311 478 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 GDI2P2-201ENST00000445131 608 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 TRGVB-201ENST00000453257 471 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC017015.1-201ENST00000477387 286 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RPL35P6-201ENST00000490024 372 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 POU5F1P7-201ENST00000508759 541 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 PTGES3P3-201ENST00000511479 482 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC108064.1-201ENST00000513791 460 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC022878.1-201ENST00000530684 149 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC090502.2-201ENST00000549267 280 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 MIR8069-1-201ENST00000616627 86 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC009237.17-201ENST00000618111 748 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 MIR8069-2-201ENST00000621412 86 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 DUXAP9-208ENST00000622815 614 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 AC099654.5-201ENST00000636479 350 ntBASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CTDP1Q9Y5B0 MTND4P29-201ENST00000503122 1372 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 Z82217.1-201ENST00000625157 8149 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 SNORA57.1-201ENST00000391227 145 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 MTCO3P40-201ENST00000392516 676 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 SNRPEP2-201ENST00000397592 279 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 RPS3AP36-201ENST00000398190 775 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 RNU2-65P-201ENST00000410162 185 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 RNU6-628P-201ENST00000410675 107 ntBASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.05□□□□□ -1.6
CTDP1Q9Y5B0 RPL21P91-201ENST00000429231 479 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms