Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC106782.4-201ENST00000568264 210 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 LARP7P2-201ENST00000575306 125 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 BDH2P1-201ENST00000602288 736 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC096947.1-201ENST00000603233 470 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC106028.5-201ENST00000610332 395 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC005344.1-201ENST00000613391 459 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AL356585.4-201ENST00000623078 1229 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 OR1S1-201ENST00000624470 978 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 U6.105-201ENST00000637379 88 ntBASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPH3AQ9Y2J0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 EI24P2-201ENST00000397776 1076 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 HLFP1-201ENST00000402375 499 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 RN7SKP53-201ENST00000411337 315 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 OR4K6P-201ENST00000416478 897 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AL137014.1-201ENST00000420490 1226 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC007435.1-201ENST00000421086 415 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 MTCO1P39-201ENST00000426148 480 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC079780.1-201ENST00000428259 207 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 HMGN2P31-201ENST00000432430 273 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 RPL17P49-201ENST00000443728 411 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC098824.1-201ENST00000453565 980 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 SUMO2P2-201ENST00000456482 255 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 OR4G11P-201ENST00000492842 939 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC010342.1-201ENST00000514047 877 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 RNA5SP164-201ENST00000516533 110 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 SCARNA1-201ENST00000517138 166 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC010198.2-201ENST00000550612 259 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 SETP7-201ENST00000552169 453 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 MIR4513-201ENST00000581077 86 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC245036.5-201ENST00000596330 847 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AL022067.1-201ENST00000602426 454 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AL606834.3-201ENST00000602615 496 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 CYCSP41-201ENST00000616920 296 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AC099654.8-201ENST00000637757 681 ntBASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.47□□□□□ -1.85
RPH3AQ9Y2J0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RPH3AQ9Y2J0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.46□□□□□ -1.85
RPH3AQ9Y2J0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
RPH3AQ9Y2J0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RPH3AQ9Y2J0 AL645937.1-201ENST00000641739 1652 ntBASIC3.46□□□□□ -1.85
RPH3AQ9Y2J0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 AC021755.1-201ENST00000559747 1447 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 SNRPEP2-201ENST00000397592 279 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 RPL30P2-201ENST00000414021 291 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 RPL7P30-201ENST00000420888 709 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 AC092427.1-201ENST00000439177 601 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 RPL39P6-201ENST00000448289 150 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 OFD1P3Y-201ENST00000453312 783 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 NANOGP10-201ENST00000453325 895 ntBASIC3.46□□□□□ -1.86
RPH3AQ9Y2J0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms