Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL121972.1-201ENST00000402023 252 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC073264.1-201ENST00000411508 416 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 Z92545.1-201ENST00000411782 234 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL024507.1-201ENST00000412741 274 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC012065.2-201ENST00000421295 375 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC233981.1-201ENST00000423224 461 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 NAP1L1P3-201ENST00000462291 880 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 RPL21P18-201ENST00000469899 480 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC109925.1-201ENST00000478069 331 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 RPS29P2-201ENST00000479278 136 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 RPS3AP43-201ENST00000479743 781 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC012181.1-201ENST00000479895 423 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC119751.1-201ENST00000513357 765 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC104057.1-201ENST00000515547 497 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 RNA5SP380-201ENST00000517190 98 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 MIR3690-201ENST00000580266 75 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 MIR2682-201ENST00000580305 110 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL020997.3-201ENST00000602843 359 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL160281.1-201ENST00000605307 311 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC107294.3-201ENST00000609211 526 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL391834.2-201ENST00000609982 546 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 AC104763.3-201ENST00000613765 618 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 RNU6-353P-201ENST00000364266 108 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 SNORA48.5-201ENST00000391143 135 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 GSTA8P-201ENST00000404253 637 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 RNU2-71P-201ENST00000411395 189 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC009237.2-201ENST00000421358 284 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 RN7SL863P-201ENST00000462370 296 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 RPS27AP1-201ENST00000475545 471 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 HMGB1P38-201ENST00000490557 577 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AP003355.1-201ENST00000518956 587 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 NIFKP8-201ENST00000560500 874 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC245884.10-201ENST00000597355 337 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AL357094.1-201ENST00000603845 844 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC018692.3-201ENST00000623929 123 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 AC097655.1-201ENST00000635075 318 ntBASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLIP2Q9UDT6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 MTND4P34-201ENST00000572715 1371 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 U3.11-201ENST00000364476 212 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 MTCO2P31-201ENST00000402702 684 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AL138880.1-201ENST00000405824 642 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AL583834.1-201ENST00000406943 343 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AC007899.1-201ENST00000412776 775 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 UBE2V1P9-201ENST00000414760 368 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AC006960.1-201ENST00000419980 153 ntBASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.77□□□□□ -1.81
CLIP2Q9UDT6 AL353705.1-201ENST00000433468 480 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms