Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC025458.1-201ENST00000506046 166 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-1069P-201ENST00000516612 133 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 RN7SKP35-201ENST00000517210 151 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC090115.3-201ENST00000553218 849 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 MIR5188-201ENST00000583467 113 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AC104763.2-201ENST00000604179 382 ntBASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CUEDC1Q9NWM3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU1-134P-201ENST00000362935 165 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.314-201ENST00000365114 102 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-61P-201ENST00000365528 109 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.506-201ENST00000384494 102 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNA5SP284-201ENST00000384547 118 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-1127P-201ENST00000384580 107 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 SNORD58.1-201ENST00000391313 66 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU2-14P-201ENST00000411053 191 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-293P-201ENST00000411259 106 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AL096829.1-201ENST00000413677 457 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RPL31P2-201ENST00000413849 377 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 HMGA1P8-201ENST00000414130 321 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 BX682237.1-201ENST00000415016 335 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 CYCSP10-201ENST00000417973 294 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC130360.1-201ENST00000425489 1117 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC083829.1-201ENST00000503756 657 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC104806.1-201ENST00000508720 308 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC130365.2-201ENST00000525882 1201 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC007225.2-201ENST00000562529 256 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 COX6CP3-201ENST00000580869 223 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC024619.4-201ENST00000580924 316 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AC092266.1-201ENST00000610958 165 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 AL118522.2-201ENST00000616045 615 ntBASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CUEDC1Q9NWM3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 ZNF33CP-201ENST00000432492 2030 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-212P-201ENST00000362642 104 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RN7SKP162-201ENST00000363605 345 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 SNORD27-201ENST00000363981 72 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.274-201ENST00000364714 101 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.399-201ENST00000383955 105 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-398P-201ENST00000384143 109 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.539-201ENST00000384635 107 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC097374.1-203ENST00000400783 485 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AL136372.1-201ENST00000403060 228 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC096664.2-201ENST00000411843 406 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RPL35AP31-201ENST00000418340 337 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RPL31P45-201ENST00000419532 356 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AL590632.1-201ENST00000424289 371 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RPL7P2-201ENST00000427639 268 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 CALM2P2-201ENST00000428512 440 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AL590233.1-201ENST00000430017 456 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms