Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SNRPGP15-201ENST00000600149 222 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AP000526.1-201ENST00000603308 1388 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 FRG1BP-201ENST00000278882 761 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 SNORA7.2-201ENST00000364446 145 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AL359511.1-201ENST00000402970 211 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPS27P5-201ENST00000444247 244 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 OR6C72P-201ENST00000451403 892 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC089999.1-201ENST00000460336 374 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPL21P104-201ENST00000464143 478 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RPS27P27-201ENST00000498779 255 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC093755.1-201ENST00000512950 1023 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 SNORD53-201ENST00000579969 78 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 AC091046.2-201ENST00000620775 665 ntBASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KIAA1549Q9HCM3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 MTND4P34-201ENST00000572715 1371 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AC103988.1-201ENST00000566382 2177 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AC097714.1-201ENST00000511272 1647 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AL021368.2-201ENST00000606125 5352 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 DHFRP5-201ENST00000406944 564 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 MUPP-201ENST00000438111 566 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 RPL9P32-201ENST00000464118 620 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AC104472.2-201ENST00000469035 601 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 RNA5SP468-201ENST00000516782 93 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AC006023.2-201ENST00000609916 167 ntBASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KIAA1549Q9HCM3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC013404.1-201ENST00000413068 249 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC002076.2-201ENST00000617362 122 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC079228.1-201ENST00000624774 1049 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 SNORD88.1-201ENST00000408684 91 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AL139415.2-201ENST00000431968 163 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 UBE2V2P1-201ENST00000434717 398 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AL121890.1-201ENST00000435457 205 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 OR6K1P-201ENST00000456766 971 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 VN1R17P-201ENST00000472048 1090 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 SNORD116-30-201ENST00000516468 85 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC011468.4-201ENST00000603942 409 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC090425.2-201ENST00000608818 501 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 AC092184.1-201ENST00000625042 715 ntBASIC2.23□□□□□ -2.05
KIAA1549Q9HCM3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms