Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AP000766.1-201ENST00000561746 4140 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AP002833.3-201ENST00000625075 2265 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RNA5SP114-201ENST00000363780 113 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RNU6-438P-201ENST00000365561 103 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RNU6-1245P-201ENST00000411130 106 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 CYCSP19-201ENST00000411715 316 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 FTH1P10-202ENST00000430907 550 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 GPM6BP3-201ENST00000442797 145 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RPS16P9-201ENST00000477220 427 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 MYL6P4-201ENST00000477911 453 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RN7SL629P-201ENST00000489622 285 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AC020895.1-201ENST00000595362 272 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 AL162726.3-218ENST00000636401 95 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 PHKBP1-201ENST00000450951 1951 ntBASIC7.84□□□□□ -1.15
RNF39Q9H2S5 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF39Q9H2S5 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
RNF39Q9H2S5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.16
RNF39Q9H2S5 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.84□□□□□ -1.16
RNF39Q9H2S5 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.16
RNF39Q9H2S5 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.84□□□□□ -1.16
RNF39Q9H2S5 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 RNA5SP472-201ENST00000363868 119 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 BTF3P4-201ENST00000418852 495 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 OR2AM1P-201ENST00000422137 422 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 RPL23AP95-201ENST00000426806 265 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 AC243964.1-201ENST00000441814 261 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 SRP68P2-201ENST00000456184 254 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 Y_RNA.659-201ENST00000515994 113 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 MIR4712-201ENST00000583750 82 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 CR382285.1-202ENST00000604687 547 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 U7.4-201ENST00000614961 63 ntBASIC7.83□□□□□ -1.16
RNF39Q9H2S5 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
RNF39Q9H2S5 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 RPL23P2-201ENST00000320371 421 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 RNU6-1167P-201ENST00000363227 94 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 SNORD32A-201ENST00000364805 84 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 RNU1-74P-201ENST00000384108 171 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AC092447.6-201ENST00000414578 210 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AL138899.2-201ENST00000439139 499 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AC004223.1-201ENST00000479840 271 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 RNU7-115P-201ENST00000516433 55 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 SCARNA18.2-201ENST00000516882 84 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 SCARNA11.1-201ENST00000516918 132 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 IGLVI-42-201ENST00000522485 381 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 RN7SL32P-201ENST00000580514 281 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms