Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MTND5P33-201ENST00000571250 1450 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC008033.1-201ENST00000216407 1162 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 U8.3-201ENST00000363321 132 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SNORD113.2-201ENST00000364166 89 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC006548.1-201ENST00000427470 102 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ISCA1P6-201ENST00000427740 390 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AL049745.1-201ENST00000433953 286 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC093899.1-201ENST00000457984 376 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 RPL12P20-201ENST00000475538 479 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AL139099.1-201ENST00000497398 403 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC015795.1-201ENST00000513669 327 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 RNU2-46P-201ENST00000517038 113 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC123904.2-201ENST00000548059 300 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SETP7-201ENST00000552169 453 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC006960.3-201ENST00000561845 705 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AL391840.1-201ENST00000571144 367 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 RN7SL690P-201ENST00000582087 240 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC068790.3-201ENST00000602988 553 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC055876.5-201ENST00000605667 259 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AP002360.3-201ENST00000607673 710 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 BX664608.1-201ENST00000610519 487 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AL161616.1-201ENST00000611867 286 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 CR381572.1-201ENST00000625098 102 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SEPT14P19-203ENST00000633205 211 ntBASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 AC009902.3-201ENST00000606235 2172 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 OR4K15-201ENST00000305051 1216 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RN7SKP226-201ENST00000364912 300 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 Y_RNA.296-201ENST00000364930 108 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RNU6-837P-201ENST00000391056 108 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RNU4-78P-201ENST00000410940 126 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL132765.1-201ENST00000434165 553 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 DNAJC19P4-201ENST00000440115 345 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RPL23AP43-201ENST00000446445 471 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC083829.1-201ENST00000503756 657 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC022483.1-201ENST00000514020 567 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 RNU6-506P-201ENST00000516553 94 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 MYL12AP1-201ENST00000518490 515 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AP003497.1-201ENST00000528472 562 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AP003181.2-201ENST00000528941 181 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 DEFB109D-201ENST00000529497 240 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AP001781.1-201ENST00000530977 207 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC069240.1-201ENST00000548774 375 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL356432.3-201ENST00000568952 465 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms