Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC091021.1-201ENST00000468051 388 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC096745.1-201ENST00000509945 370 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RNA5SP116-201ENST00000516132 98 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 DEFB108E-201ENST00000524692 240 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC004024.1-201ENST00000549244 247 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC026371.1-201ENST00000551867 419 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC004584.2-201ENST00000570407 410 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC017100.2-201ENST00000584628 355 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 AC020765.1-201ENST00000604296 328 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC009237.3-203ENST00000442128 3551 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC009902.3-201ENST00000606235 2172 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC092821.3-202ENST00000641304 2767 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RNU6-1317P-201ENST00000364582 104 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 Y_RNA.471-201ENST00000384312 102 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 MIR433-201ENST00000384837 93 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RNU6-1168P-201ENST00000390831 104 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AL078599.1-201ENST00000402075 293 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RNU6-130P-201ENST00000411112 103 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RNU6-293P-201ENST00000411259 106 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC114491.1-201ENST00000416095 246 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RHOT1P3-201ENST00000436571 331 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RPL23AP22-201ENST00000437556 453 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 HMGN3P1-201ENST00000453847 193 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC108059.3-201ENST00000456388 214 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CYCSP34-201ENST00000458172 304 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RPL21P104-201ENST00000464143 478 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 RN7SL570P-201ENST00000484405 292 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 HMGB1P40-201ENST00000525121 540 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 MRPS36P4-201ENST00000534436 298 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC007224.1-201ENST00000564410 144 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 AL355488.2-201ENST00000609909 2850 ntBASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL25A1Q9BXS0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AC010168.2-201ENST00000562691 5428 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 RNU6-444P-201ENST00000383988 108 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 MIR19A-201ENST00000384878 82 ntBASIC5.75□□□□□ -1.49
COL25A1Q9BXS0 RPL31P45-201ENST00000419532 356 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms