Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU5A-6P-201ENST00000384136 116 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AL590704.1-201ENST00000402856 794 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 RAB9AP3-201ENST00000412737 573 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC005517.2-201ENST00000424673 553 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 EZH2P1-201ENST00000431167 291 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC138761.5-201ENST00000433967 325 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 RPS17P8-201ENST00000434525 335 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 MTATP6P30-201ENST00000443540 664 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 NFU1P2-201ENST00000448700 469 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 RAB9AP1-201ENST00000449393 573 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC098824.1-201ENST00000453565 980 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 UBDP1-202ENST00000457888 382 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 snoU109.4-201ENST00000458953 143 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 SNORD42A-201ENST00000459584 64 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 PDCD5P1-201ENST00000543528 309 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 KC877982.1-201ENST00000602313 470 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 SEPT7P9-203ENST00000604116 343 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 BCRP9-201ENST00000605312 388 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AL391261.4-201ENST00000616012 481 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC104260.1-201ENST00000616660 539 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 BMS1P21-201ENST00000634565 365 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 RPS4XP5-202ENST00000449995 1334 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 MTND5P17-201ENST00000418405 1603 ntBASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 AC112198.2-201ENST00000426589 6996 ntBASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 NMD3P1-201ENST00000439704 1488 ntBASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 AP002001.2-201ENST00000529025 1469 ntBASIC4.65□□□□□ -1.66
LRFN3Q9BTN0 RNU6-181P-201ENST00000363225 107 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 RNU6-359P-201ENST00000365466 108 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 RNU6-533P-201ENST00000384144 107 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 RNU6-821P-201ENST00000390995 107 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 Z98745.1-201ENST00000402553 494 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 CIR1P3-201ENST00000405137 479 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 USP9YP13-201ENST00000417797 480 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 CYCSP32-201ENST00000440548 321 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 Z99127.3-201ENST00000448158 395 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AL118496.2-201ENST00000448300 230 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 KLF3P2-201ENST00000465138 268 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 RPS3AP17-201ENST00000472594 777 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC090686.1-201ENST00000481577 749 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 LARP1BP2-201ENST00000486594 519 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC023424.2-201ENST00000493479 777 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 COX7A2P2-201ENST00000505291 250 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC022483.1-201ENST00000514020 567 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AL359219.2-201ENST00000555184 348 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 MIR5685-201ENST00000579080 79 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC005730.3-201ENST00000583067 366 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AP000907.4-201ENST00000604143 237 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AC005034.5-201ENST00000604219 466 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 AL121757.2-201ENST00000611223 313 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms