Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
IFT140Q96RY7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
IFT140Q96RY7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
IFT140Q96RY7 AL606490.7-201ENST00000433136 191 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 AC011037.1-201ENST00000483964 558 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.73□□□□□ -1.81
IFT140Q96RY7 AC012182.1-201ENST00000570133 895 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 AC010378.1-201ENST00000619270 362 ntBASIC3.73□□□□□ -1.81
IFT140Q96RY7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
IFT140Q96RY7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 FAT1P1-201ENST00000406588 507 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
IFT140Q96RY7 SPA17P1-201ENST00000416656 452 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AL645939.1-201ENST00000453429 797 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 AP000926.1-201ENST00000479573 241 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 CCNHP1-201ENST00000513311 678 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 RNA5SP200-201ENST00000516360 103 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 RNA5SP380-201ENST00000517190 98 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AP001207.1-201ENST00000524051 481 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 OR4U1P-201ENST00000554958 912 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC105137.2-201ENST00000569073 466 ntBASIC3.72□□□□□ -1.81
IFT140Q96RY7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.72□□□□□ -1.81
IFT140Q96RY7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
IFT140Q96RY7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.71□□□□□ -1.81
IFT140Q96RY7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.71□□□□□ -1.82
IFT140Q96RY7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
IFT140Q96RY7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
IFT140Q96RY7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
IFT140Q96RY7 SNORA11.4-201ENST00000408823 129 ntBASIC3.71□□□□□ -1.82
IFT140Q96RY7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
IFT140Q96RY7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.71□□□□□ -1.82
IFT140Q96RY7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.71□□□□□ -1.82
IFT140Q96RY7 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
IFT140Q96RY7 RPL38P4-201ENST00000502376 214 ntBASIC3.71□□□□□ -1.82
IFT140Q96RY7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.71□□□□□ -1.82
IFT140Q96RY7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.71□□□□□ -1.82
IFT140Q96RY7 AC009501.3-201ENST00000605001 1352 ntBASIC3.7□□□□□ -1.82
IFT140Q96RY7 AL356806.1-201ENST00000422524 916 ntBASIC3.7□□□□□ -1.82
IFT140Q96RY7 AC098826.1-201ENST00000433943 471 ntBASIC3.7□□□□□ -1.82
IFT140Q96RY7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
IFT140Q96RY7 AC004866.2-201ENST00000438285 481 ntBASIC3.7□□□□□ -1.82
IFT140Q96RY7 AC025260.1-201ENST00000548858 430 ntBASIC3.7□□□□□ -1.82
IFT140Q96RY7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
IFT140Q96RY7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.7□□□□□ -1.82
IFT140Q96RY7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
IFT140Q96RY7 SNORD21-201ENST00000383953 95 ntBASIC3.69□□□□□ -1.82
IFT140Q96RY7 ELOCP13-201ENST00000443934 329 ntBASIC3.69□□□□□ -1.82
IFT140Q96RY7 COX6CP2-201ENST00000444980 225 ntBASIC3.69□□□□□ -1.82
IFT140Q96RY7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.69□□□□□ -1.82
IFT140Q96RY7 TRBV26-201ENST00000456572 344 ntBASIC3.69□□□□□ -1.82
IFT140Q96RY7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.69□□□□□ -1.82
IFT140Q96RY7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.69□□□□□ -1.82
IFT140Q96RY7 AC245517.5-201ENST00000611529 162 ntBASIC3.69□□□□□ -1.82
IFT140Q96RY7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
IFT140Q96RY7 Y_RNA.355-201ENST00000365462 98 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 Y_RNA.466-201ENST00000384294 113 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.68□□□□□ -1.82
IFT140Q96RY7 ARF4P2-201ENST00000430209 526 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.68□□□□□ -1.82
IFT140Q96RY7 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.68□□□□□ -1.82
IFT140Q96RY7 AL356266.1-201ENST00000623311 483 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AL359715.4-201ENST00000606629 1436 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AC009487.4-201ENST00000624969 3585 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 AC005539.1-201ENST00000443768 1479 ntBASIC3.68□□□□□ -1.82
IFT140Q96RY7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 AL513175.2-201ENST00000422071 443 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 AL445646.1-201ENST00000431784 216 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 AL035551.1-201ENST00000446931 348 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
IFT140Q96RY7 AIMP1P1-201ENST00000418670 937 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 AP004372.1-201ENST00000604842 844 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 AC009831.4-201ENST00000620744 325 ntBASIC3.67□□□□□ -1.82
IFT140Q96RY7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.67□□□□□ -1.82
IFT140Q96RY7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IFT140Q96RY7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms