Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AL109766.1-201ENST00000555080 552 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 TVP23BP1-201ENST00000557500 617 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 LINC00622-201ENST00000562811 1570 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC068790.5-201ENST00000602741 355 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 BNIP3P11-201ENST00000603878 563 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AP000907.4-201ENST00000604143 237 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC011451.2-201ENST00000604303 598 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AL160290.3-201ENST00000604869 165 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC113403.1-201ENST00000604910 193 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 BCRP9-201ENST00000605312 388 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC015813.4-201ENST00000610469 179 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC131902.3-201ENST00000611767 581 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC068831.8-201ENST00000620171 435 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC022140.2-201ENST00000623500 188 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC068724.3-201ENST00000625906 87 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DUX3Q96PT4 AC025125.1-201ENST00000624743 1922 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 AL158163.1-201ENST00000603915 1649 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 SAGE2P-201ENST00000420011 2126 ntBASIC3.4□□□□□ -1.87
DUX3Q96PT4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
DUX3Q96PT4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DUX3Q96PT4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 OR4G11P-202ENST00000642116 1414 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 RNA5SP391-201ENST00000363456 119 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 RNU6-1090P-201ENST00000364065 94 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 RN7SKP227-201ENST00000364445 330 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 Y_RNA.409-201ENST00000383990 98 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 MIR124-3-201ENST00000384866 87 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC016769.3-201ENST00000396562 315 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 EIF5P1-201ENST00000400019 1231 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 TMSB4XP8-201ENST00000402089 135 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DUX3Q96PT4 MIR1193-201ENST00000408109 78 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 Y_RNA.598-201ENST00000410480 95 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 USP9YP6-201ENST00000413550 854 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 TMSB4XP6-201ENST00000415187 135 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 Z74021.1-201ENST00000423610 407 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 RPL23AP38-201ENST00000423801 469 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 TMSB4XP1-201ENST00000424567 135 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 PGBD4P3-201ENST00000440731 581 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 USP9YP34-201ENST00000453983 808 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 OR6K1P-201ENST00000456766 971 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC053481.1-201ENST00000467217 306 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 RPL35AP15-201ENST00000468042 339 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 RPS3AP14-201ENST00000483907 780 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC041039.1-201ENST00000485656 536 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC108022.1-201ENST00000493466 478 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC068305.1-201ENST00000497406 726 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 RNU6-430P-201ENST00000517078 107 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC104986.1-201ENST00000517978 436 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AP003122.4-201ENST00000530980 758 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 TRAV8-5-201ENST00000537369 341 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC136624.4-201ENST00000573044 370 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 AL020997.2-201ENST00000602607 184 ntBASIC3.39□□□□□ -1.87
DUX3Q96PT4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.39□□□□□ -1.87
DUX3Q96PT4 BPIFA4P-203ENST00000603168 689 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms