Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 MTND1P27-201ENST00000451117 902 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AP001025.2-201ENST00000490908 477 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC104164.2-201ENST00000496953 495 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC010625.1-201ENST00000511296 403 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC006064.5-201ENST00000541782 248 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 CENPUP2-201ENST00000555897 1186 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC005771.1-201ENST00000585581 349 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AL390208.1-201ENST00000605885 644 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC009237.17-201ENST00000618111 748 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AC073968.1-201ENST00000618594 637 ntBASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM43Q96BQ3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC116667.1-201ENST00000604855 2072 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AL672167.1-205ENST00000641112 3080 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 SNORA5A-201ENST00000384111 134 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 SNORA75-201ENST00000384158 137 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 RNU6-809P-201ENST00000384461 107 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 SNORA57.3-201ENST00000411095 141 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 Z97055.1-201ENST00000419730 712 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 RPL23AP25-201ENST00000430973 463 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 RSU1P2-202ENST00000437884 485 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 GDI2P2-201ENST00000445131 608 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC073587.1-201ENST00000447093 876 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AP000542.1-201ENST00000448473 371 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 USP9YP12-201ENST00000450481 570 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 NANOGP10-201ENST00000453325 895 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 RPL38P1-201ENST00000460914 211 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 TXNP6-201ENST00000510190 310 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC093853.1-201ENST00000515689 483 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AP002748.2-201ENST00000528671 348 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC011471.1-201ENST00000585766 187 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 TPMTP1-201ENST00000592307 737 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC025165.5-201ENST00000602802 578 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 SEPT7P9-203ENST00000604116 343 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC008121.2-201ENST00000614647 523 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 PABPC1P7-201ENST00000413177 1513 ntBASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TRIM43Q96BQ3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 MTND4P5-201ENST00000435821 1374 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL139811.1-201ENST00000424779 2299 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 RNY4P24-201ENST00000362735 96 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 RNU6-343P-201ENST00000364709 104 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 RNU6-533P-201ENST00000384144 107 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 SNORA70E-201ENST00000384492 135 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 RNU6-192P-201ENST00000391253 100 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 MTND4LP20-201ENST00000402379 270 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 AL592291.1-201ENST00000403830 352 ntBASIC4.53□□□□□ -1.68
TRIM43Q96BQ3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms