Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TOPBP1Q92547 PTP4A1P1-201ENST00000420539 515 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 MTCYBP14-201ENST00000457471 715 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 RNA5SP76-201ENST00000516277 87 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.65□□□□□ -1.82
TOPBP1Q92547 AP003467.2-201ENST00000520175 319 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 AL451074.6-201ENST00000608512 729 ntBASIC3.65□□□□□ -1.82
TOPBP1Q92547 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TOPBP1Q92547 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TOPBP1Q92547 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TOPBP1Q92547 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TOPBP1Q92547 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 AC107015.1-201ENST00000466902 747 ntBASIC3.65□□□□□ -1.83
TOPBP1Q92547 RPL9P33-201ENST00000484311 566 ntBASIC3.65□□□□□ -1.83
TOPBP1Q92547 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.65□□□□□ -1.83
TOPBP1Q92547 RN7SKP5-201ENST00000517045 272 ntBASIC3.65□□□□□ -1.83
TOPBP1Q92547 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.65□□□□□ -1.83
TOPBP1Q92547 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TOPBP1Q92547 AC010733.2-201ENST00000589496 5702 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 Y_RNA.796-201ENST00000364268 102 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 Y_RNA.799-201ENST00000364992 102 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 RPS26P30-201ENST00000443431 335 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOPBP1Q92547 PDCL2P2-201ENST00000533651 189 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 AP003499.2-201ENST00000624100 483 ntBASIC3.64□□□□□ -1.83
TOPBP1Q92547 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.64□□□□□ -1.83
TOPBP1Q92547 AC245100.2-201ENST00000454544 1679 ntBASIC3.63□□□□□ -1.83
TOPBP1Q92547 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TOPBP1Q92547 AL357520.1-201ENST00000441557 453 ntBASIC3.63□□□□□ -1.83
TOPBP1Q92547 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.63□□□□□ -1.83
TOPBP1Q92547 MTCYBP19-201ENST00000517463 1124 ntBASIC3.63□□□□□ -1.83
TOPBP1Q92547 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.63□□□□□ -1.83
TOPBP1Q92547 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.63□□□□□ -1.83
TOPBP1Q92547 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
TOPBP1Q92547 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TOPBP1Q92547 AC091152.2-201ENST00000591628 2569 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TOPBP1Q92547 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TOPBP1Q92547 AL450326.2-201ENST00000421913 1962 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.62□□□□□ -1.83
TOPBP1Q92547 SNORD88.1-201ENST00000408684 91 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 RNU6-1140P-201ENST00000410517 106 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 RPS15AP6-201ENST00000420703 385 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 AC106901.1-201ENST00000425086 698 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 AC098583.1-201ENST00000480875 255 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 HMGB1P41-201ENST00000520234 440 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 MIR8070-201ENST00000616510 88 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 AP006248.2-201ENST00000623309 592 ntBASIC3.62□□□□□ -1.83
TOPBP1Q92547 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TOPBP1Q92547 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.62□□□□□ -1.83
TOPBP1Q92547 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOPBP1Q92547 AC244505.4-201ENST00000434905 287 ntBASIC3.61□□□□□ -1.83
TOPBP1Q92547 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 SSXP5-201ENST00000443473 287 ntBASIC3.61□□□□□ -1.83
TOPBP1Q92547 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 AC107918.3-201ENST00000533272 382 ntBASIC3.61□□□□□ -1.83
TOPBP1Q92547 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 AC128687.1-201ENST00000605304 619 ntBASIC3.61□□□□□ -1.83
TOPBP1Q92547 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.61□□□□□ -1.83
TOPBP1Q92547 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOPBP1Q92547 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TOPBP1Q92547 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOPBP1Q92547 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.61□□□□□ -1.83
TOPBP1Q92547 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOPBP1Q92547 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.6□□□□□ -1.83
TOPBP1Q92547 OR5H15-201ENST00000383696 930 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TOPBP1Q92547 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.6□□□□□ -1.83
TOPBP1Q92547 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.6□□□□□ -1.83
TOPBP1Q92547 AP000893.1-201ENST00000474462 794 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 RNA5SP380-201ENST00000517190 98 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 OR4U1P-201ENST00000554958 912 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 AC009570.1-201ENST00000609599 745 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 AL359198.2-201ENST00000611836 194 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TOPBP1Q92547 AC013470.3-201ENST00000420252 1194 ntBASIC3.6□□□□□ -1.83
TOPBP1Q92547 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms