Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 USP9YP34-201ENST00000453983 808 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 SETP11-201ENST00000473027 690 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 RPL21P103-201ENST00000479921 488 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC021146.1-201ENST00000511202 716 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC087276.1-201ENST00000529659 480 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 RPL23AP92-201ENST00000603609 255 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 BNIP3P11-201ENST00000603878 563 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC080013.4-201ENST00000607624 649 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC009318.4-201ENST00000620496 486 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 AC091965.5-201ENST00000624785 342 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 RNA5SP196-201ENST00000625967 102 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 MIR4496-201ENST00000635896 61 ntBASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC44A1Q8WWI5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 MTCO1P23-201ENST00000415223 1526 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RNA5SP88-201ENST00000365560 109 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 SNORA70E-201ENST00000384492 135 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-328P-201ENST00000390887 106 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RN7SKP263-201ENST00000411194 309 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RPL31P45-201ENST00000419532 356 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 ZYG11AP1-201ENST00000430329 837 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 MTND1P20-201ENST00000430341 950 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 MTND4P32-201ENST00000437189 1237 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC118469.1-201ENST00000442943 488 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC073387.1-201ENST00000453261 709 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 PABPC1P3-201ENST00000469174 459 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL136126.1-201ENST00000473603 402 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC072039.1-201ENST00000477611 581 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 TMEM251P1-201ENST00000503717 318 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC011260.1-201ENST00000578420 472 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 KLKP1-201ENST00000595979 403 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 WISP1-OT1-201ENST00000602893 642 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL590229.1-201ENST00000603497 542 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 SNORA62.6-201ENST00000606322 83 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AL513477.2-201ENST00000607858 568 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC025588.4-201ENST00000615802 908 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 MIR7844-201ENST00000616161 122 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 AC091931.1-201ENST00000623488 728 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 CYP3A51P-201ENST00000633513 256 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 MIR492-201ENST00000638676 116 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 ELL2P3-201ENST00000457883 1602 ntBASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC44A1Q8WWI5 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC021755.1-201ENST00000559747 1447 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AP002907.1-201ENST00000606361 1430 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms