Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 XIAPP3-201ENST00000312918 795 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 Y_RNA.226-201ENST00000364337 114 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 RNA5SP239-201ENST00000410218 129 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 AP000926.3-201ENST00000497201 299 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 AL022099.1-201ENST00000604551 712 ntBASIC3.09□□□□□ -1.91
XRN1Q8IZH2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.09□□□□□ -1.91
XRN1Q8IZH2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.09□□□□□ -1.92
XRN1Q8IZH2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.09□□□□□ -1.92
XRN1Q8IZH2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.09□□□□□ -1.92
XRN1Q8IZH2 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.92
XRN1Q8IZH2 AC011460.1-201ENST00000636268 1834 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.08□□□□□ -1.92
XRN1Q8IZH2 AC098826.1-201ENST00000433943 471 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 HMGB1P48-201ENST00000446155 598 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 RNU6-295P-201ENST00000516901 104 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.08□□□□□ -1.92
XRN1Q8IZH2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
XRN1Q8IZH2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
XRN1Q8IZH2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
XRN1Q8IZH2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.08□□□□□ -1.92
XRN1Q8IZH2 RNU6-178P-201ENST00000384631 104 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 RN7SKP210-201ENST00000459176 261 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 FAM172BP-201ENST00000487497 1089 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC008126.1-201ENST00000549019 480 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 PHKBP1-201ENST00000450951 1951 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 SAR1AP4-201ENST00000429225 591 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC007677.1-201ENST00000445757 515 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC068339.2-201ENST00000534395 618 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.07□□□□□ -1.92
XRN1Q8IZH2 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
XRN1Q8IZH2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.06□□□□□ -1.92
XRN1Q8IZH2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AC093591.3-201ENST00000634516 308 ntBASIC3.06□□□□□ -1.92
XRN1Q8IZH2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
XRN1Q8IZH2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 MIR142-201ENST00000384835 87 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 Y_RNA.595-201ENST00000410403 105 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 NDUFS5P3-201ENST00000450668 321 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 MIR4498-201ENST00000577599 66 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AL359893.1-201ENST00000447628 1580 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 RNU6-328P-201ENST00000390887 106 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 RPL23AP62-201ENST00000463396 453 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC004263.1-201ENST00000479327 332 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC117522.2-201ENST00000510049 657 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.05□□□□□ -1.92
XRN1Q8IZH2 AC245517.5-201ENST00000611529 162 ntBASIC3.05□□□□□ -1.92
XRN1Q8IZH2 MIR21-201ENST00000362134 72 ntBASIC3.04□□□□□ -1.92
XRN1Q8IZH2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.04□□□□□ -1.92
XRN1Q8IZH2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
XRN1Q8IZH2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
XRN1Q8IZH2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
XRN1Q8IZH2 AC011494.1-201ENST00000596454 237 ntBASIC3.04□□□□□ -1.92
XRN1Q8IZH2 AL645944.1-201ENST00000603857 493 ntBASIC3.04□□□□□ -1.92
XRN1Q8IZH2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
XRN1Q8IZH2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
XRN1Q8IZH2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
XRN1Q8IZH2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
XRN1Q8IZH2 Y_RNA.140-201ENST00000363474 103 ntBASIC3.03□□□□□ -1.92
XRN1Q8IZH2 NPM1P10-201ENST00000398310 865 ntBASIC3.03□□□□□ -1.92
XRN1Q8IZH2 SNORA11.4-201ENST00000408823 129 ntBASIC3.03□□□□□ -1.92
XRN1Q8IZH2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.03□□□□□ -1.92
XRN1Q8IZH2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.03□□□□□ -1.92
XRN1Q8IZH2 HMGB1P41-201ENST00000520234 440 ntBASIC3.03□□□□□ -1.92
XRN1Q8IZH2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms