Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC012669.1-201ENST00000603209 283 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC090948.1-201ENST00000607464 549 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC011944.2-201ENST00000624440 683 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AL159972.1-201ENST00000625150 448 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC068724.3-201ENST00000625906 87 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 AC099654.12-201ENST00000639868 649 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 ZNF137P-201ENST00000456718 1920 ntBASIC5.31□□□□□ -1.56
CCDC144BQ3MJ40 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 A2MP1-204ENST00000566278 4130 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL138713.1-201ENST00000624026 2130 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-1155P-201ENST00000363554 107 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 Y_RNA.548-201ENST00000384656 105 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-278P-201ENST00000390945 109 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RN7SKP167-201ENST00000411047 285 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-516P-201ENST00000411381 104 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 EI24P1-201ENST00000416584 867 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 PIGFP2-201ENST00000421400 651 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MTCO3P30-201ENST00000426425 670 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL136380.1-201ENST00000447970 162 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 SRRM1P2-201ENST00000464531 1192 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC109327.1-201ENST00000471666 403 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RPS3AP17-201ENST00000472594 777 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 RPL36AP41-201ENST00000493820 306 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL161729.4-201ENST00000604650 476 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MIR6716-201ENST00000613413 80 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MIR6130-201ENST00000619419 109 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 AL023881.1-201ENST00000621088 301 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 NEAT1-202ENST00000501122 22743 ntBASIC5.3□□□□□ -1.56
CCDC144BQ3MJ40 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MTND5P26-201ENST00000426018 1752 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC024560.2-201ENST00000507981 1497 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-223P-201ENST00000362830 107 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNU5A-8P-201ENST00000364102 114 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNA5SP509-201ENST00000364577 119 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 SNORA71.2-201ENST00000364941 134 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-637P-201ENST00000384050 107 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNA5SP372-201ENST00000390836 115 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MIR1193-201ENST00000408109 78 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNU2-62P-201ENST00000410868 191 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 Z74021.1-201ENST00000423610 407 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC137499.1-201ENST00000427602 88 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 C8orf59P1-201ENST00000429930 303 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC119618.1-201ENST00000434191 222 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC093156.1-201ENST00000440382 670 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 HMGB3P30-201ENST00000457863 606 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 RNU7-59P-201ENST00000459101 61 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MTCO2P29-201ENST00000465212 189 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms