Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 OR1L1-202ENST00000373686 1083 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 SNORD67-201ENST00000390833 111 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 SSXP10-201ENST00000402595 565 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 COTL1P1-201ENST00000422309 375 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 RPL35AP12-201ENST00000425362 338 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AL050341.1-201ENST00000447743 313 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 RPS24P6-201ENST00000452670 400 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC087879.1-201ENST00000474343 374 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 RPS29P26-201ENST00000477483 171 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC012181.1-201ENST00000479895 423 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC109471.1-201ENST00000511631 612 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC009812.2-201ENST00000517657 457 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC124293.1-201ENST00000530034 493 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 OR4G1P-201ENST00000588632 938 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 HSPE1P14-201ENST00000605812 302 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 SNORD39.4-201ENST00000620099 78 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC007275.1-201ENST00000621243 671 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 AC025263.3-201ENST00000622965 1396 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.72□□□□□ -1.81
SHROOM1Q2M3G4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SHROOM1Q2M3G4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 RNU6-1000P-201ENST00000391066 106 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AL138885.1-201ENST00000405921 675 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MIR1289-1-201ENST00000408836 144 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MTCO3P12-201ENST00000416718 547 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC011242.1-201ENST00000433596 1158 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 RPL21P8-201ENST00000465083 535 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 PCBP2P3-201ENST00000509726 843 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC010374.2-201ENST00000512933 535 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC006518.1-201ENST00000541449 943 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 ZNF971P-201ENST00000562068 1249 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC006116.7-201ENST00000590141 756 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC103881.1-201ENST00000603476 538 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 VN1R74P-201ENST00000613259 503 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AC099654.8-201ENST00000637757 681 ntBASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM1Q2M3G4 AL355578.1-201ENST00000607405 1328 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 BTF3P8-201ENST00000414577 526 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 UBE2V1P9-201ENST00000414760 368 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AIMP1P1-201ENST00000418670 937 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC012497.1-201ENST00000429392 575 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC010881.1-201ENST00000433830 235 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 SEPT14P24-201ENST00000447236 180 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 RPL12P26-201ENST00000452430 487 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 RPS15AP1-201ENST00000457423 391 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 snoU13.3-201ENST00000459441 104 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC092754.2-201ENST00000463506 460 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AC091860.1-201ENST00000505723 432 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 SNORA19.3-201ENST00000516165 130 ntBASIC3.7□□□□□ -1.82
SHROOM1Q2M3G4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms