Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 AC007336.1-201ENST00000576365 3828 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 SEC63P2-201ENST00000503863 1939 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCH1Q13635 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTCH1Q13635 RNU6-482P-201ENST00000391068 107 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCH1Q13635 PNRC2P1-201ENST00000423940 420 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 RPS20P5-201ENST00000434808 360 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 UBE2D3P1-201ENST00000436669 444 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 UBE2V1P5-201ENST00000440070 405 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCH1Q13635 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCH1Q13635 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
PTCH1Q13635 AC003982.1-202ENST00000469928 248 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 RPS4XP6-201ENST00000477670 797 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCH1Q13635 RNU6-362P-201ENST00000516736 90 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 IGKV2D-23-201ENST00000518179 286 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AC083923.1-201ENST00000523708 376 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AP003122.3-201ENST00000526316 255 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.84□□□□□ -1.79
PTCH1Q13635 AC006111.3-201ENST00000622137 383 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AC103798.2-201ENST00000624292 632 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AC092608.2-201ENST00000624427 218 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AC138649.5-201ENST00000637456 137 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 AC017104.5-201ENST00000637647 639 ntBASIC3.84□□□□□ -1.79
PTCH1Q13635 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCH1Q13635 AC095050.2-201ENST00000510748 1458 ntBASIC3.84□□□□□ -1.8
PTCH1Q13635 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCH1Q13635 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCH1Q13635 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCH1Q13635 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCH1Q13635 MIR592-201ENST00000384959 97 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 ATF1P1-201ENST00000406040 927 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AC009963.1-201ENST00000417265 157 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 OR51AB1P-201ENST00000429046 620 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCH1Q13635 CKS1BP5-201ENST00000434172 273 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCH1Q13635 AL035407.2-201ENST00000454090 378 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 TVP23BP2-201ENST00000455082 615 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCH1Q13635 AC118282.1-201ENST00000506408 765 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AC104108.1-201ENST00000509930 412 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AC119751.1-201ENST00000513357 765 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 RNA5SP148-201ENST00000516527 94 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCH1Q13635 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 AC011978.2-201ENST00000569835 2054 ntBASIC3.83□□□□□ -1.8
PTCH1Q13635 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCH1Q13635 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PTCH1Q13635 ENSAP3-201ENST00000312710 333 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 RNU6-543P-201ENST00000362576 108 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 RNA5SP27-201ENST00000363839 119 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 HMGB3P31-201ENST00000413333 595 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.82□□□□□ -1.8
PTCH1Q13635 RPS15AP6-201ENST00000420703 385 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 RSL24D1P8-201ENST00000434442 492 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCH1Q13635 HMGB3P12-201ENST00000438745 556 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCH1Q13635 AC078785.3-201ENST00000476607 425 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AC078817.1-201ENST00000492623 435 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 NIPA2P2-201ENST00000496376 1083 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCH1Q13635 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PTCH1Q13635 AP003717.3-201ENST00000544832 1180 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCH1Q13635 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.82□□□□□ -1.8
PTCH1Q13635 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.82□□□□□ -1.8
PTCH1Q13635 AC092628.2-201ENST00000622492 339 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 AL590396.2-201ENST00000636511 1041 ntBASIC3.82□□□□□ -1.8
PTCH1Q13635 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PTCH1Q13635 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCH1Q13635 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 RNA5SP247-201ENST00000411181 105 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC241520.1-201ENST00000422654 1099 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC004865.1-201ENST00000442276 1003 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 RPL23AP15-201ENST00000450202 459 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC108729.2-201ENST00000476543 840 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 KCTD9P5-201ENST00000504141 1170 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCH1Q13635 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC027176.1-201ENST00000560204 514 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms