Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MFSD8-242ENST00000641690 4199 ntBASIC4.07□□□□□ -1.76
RAE1P78406 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAE1P78406 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAE1P78406 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RAE1P78406 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RAE1P78406 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 MTND5P33-201ENST00000571250 1450 ntBASIC4.06□□□□□ -1.76
RAE1P78406 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RAE1P78406 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RAE1P78406 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 SNORD51-201ENST00000384320 80 ntBASIC4.06□□□□□ -1.76
RAE1P78406 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 MIR548F1-201ENST00000408667 84 ntBASIC4.06□□□□□ -1.76
RAE1P78406 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 EIF1P3-201ENST00000423841 334 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AL589872.1-201ENST00000426602 288 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 UBE2V1P8-201ENST00000437166 265 ntBASIC4.06□□□□□ -1.76
RAE1P78406 ARPC3P1-201ENST00000437218 533 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 PHBP16-201ENST00000446318 950 ntBASIC4.06□□□□□ -1.76
RAE1P78406 TPT1P13-201ENST00000449760 499 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AC104308.1-201ENST00000454621 333 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AC021382.1-201ENST00000483523 359 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.06□□□□□ -1.76
RAE1P78406 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.06□□□□□ -1.76
RAE1P78406 NPM1P41-201ENST00000512920 831 ntBASIC4.06□□□□□ -1.76
RAE1P78406 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 RNU6-27P-201ENST00000516146 107 ntBASIC4.06□□□□□ -1.76
RAE1P78406 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.06□□□□□ -1.76
RAE1P78406 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.06□□□□□ -1.76
RAE1P78406 AC124947.2-202ENST00000552735 133 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AL365503.1-201ENST00000605247 905 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AC105429.2-201ENST00000610567 517 ntBASIC4.06□□□□□ -1.76
RAE1P78406 AL592295.2-201ENST00000612578 206 ntBASIC4.06□□□□□ -1.76
RAE1P78406 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.06□□□□□ -1.76
RAE1P78406 SNX18P1Y-201ENST00000616231 511 ntBASIC4.06□□□□□ -1.76
RAE1P78406 CR381653.2-201ENST00000624041 768 ntBASIC4.06□□□□□ -1.76
RAE1P78406 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
RAE1P78406 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAE1P78406 FAM91A3P-201ENST00000456826 2544 ntBASIC4.05□□□□□ -1.76
RAE1P78406 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAE1P78406 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAE1P78406 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RAE1P78406 Y_RNA.296-201ENST00000364930 108 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RNU6-761P-201ENST00000384148 107 ntBASIC4.05□□□□□ -1.76
RAE1P78406 MIR513A2-201ENST00000385249 127 ntBASIC4.05□□□□□ -1.76
RAE1P78406 MT-TC-201ENST00000387405 66 ntBASIC4.05□□□□□ -1.76
RAE1P78406 U3.20-201ENST00000390909 217 ntBASIC4.05□□□□□ -1.76
RAE1P78406 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RAE1P78406 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAE1P78406 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RNU2-8P-201ENST00000410727 190 ntBASIC4.05□□□□□ -1.76
RAE1P78406 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 AL132765.1-201ENST00000434165 553 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AL049734.2-201ENST00000441066 616 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 AL512326.1-201ENST00000443050 721 ntBASIC4.05□□□□□ -1.76
RAE1P78406 Z95327.1-201ENST00000446082 482 ntBASIC4.05□□□□□ -1.76
RAE1P78406 NPM1P49-201ENST00000448027 714 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RPL23AP81-201ENST00000455252 467 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RPS29P33-201ENST00000456717 146 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RPL7P15-201ENST00000461190 712 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RPL7AP28-201ENST00000464513 571 ntBASIC4.05□□□□□ -1.76
RAE1P78406 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 RPL23AP41-201ENST00000484754 458 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
RAE1P78406 COX7A2P2-201ENST00000505291 250 ntBASIC4.05□□□□□ -1.76
RAE1P78406 HMGB1P29-201ENST00000505659 499 ntBASIC4.05□□□□□ -1.76
RAE1P78406 TMEM248P1-201ENST00000510579 951 ntBASIC4.05□□□□□ -1.76
RAE1P78406 RNA5SP73-201ENST00000516744 108 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 AP003181.2-201ENST00000528941 181 ntBASIC4.05□□□□□ -1.76
RAE1P78406 OR8L1P-201ENST00000534005 955 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.05□□□□□ -1.76
RAE1P78406 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.05□□□□□ -1.76
RAE1P78406 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.05□□□□□ -1.76
RAE1P78406 CENPUP2-201ENST00000555897 1186 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.05□□□□□ -1.76
RAE1P78406 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.05□□□□□ -1.76
RAE1P78406 UBE2L4-201ENST00000587688 464 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC119501.1-201ENST00000603646 475 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC245014.2-201ENST00000603689 287 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC246785.4-201ENST00000605374 287 ntBASIC4.05□□□□□ -1.76
RAE1P78406 BX664608.1-201ENST00000610519 487 ntBASIC4.05□□□□□ -1.76
RAE1P78406 AC006329.2-201ENST00000611491 394 ntBASIC4.05□□□□□ -1.76
RAE1P78406 MIR6730-201ENST00000622213 67 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms