Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 EIF1P1-201ENST00000421436 341 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.22□□□□□ -1.73
SUMO3P55854 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 ISCA1P1-201ENST00000426679 387 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.22□□□□□ -1.73
SUMO3P55854 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AC132479.1-201ENST00000449160 144 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.22□□□□□ -1.73
SUMO3P55854 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 AC135721.1-201ENST00000497954 479 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.22□□□□□ -1.73
SUMO3P55854 AF213884.2-201ENST00000510417 903 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AP004371.1-201ENST00000525240 214 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 DEFB108D-201ENST00000527787 222 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.22□□□□□ -1.73
SUMO3P55854 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AL845331.3-202ENST00000562856 261 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.22□□□□□ -1.73
SUMO3P55854 TPRKBP2-201ENST00000565969 475 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.22□□□□□ -1.73
SUMO3P55854 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 MIR3167-201ENST00000579623 85 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 SNORD84-203ENST00000584275 78 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 SNRPGP15-201ENST00000600149 222 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 AL603758.1-201ENST00000618654 241 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SUMO3P55854 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SUMO3P55854 NXPH1-205ENST00000602349 1953 ntBASIC4.22□□□□□ -1.73
SUMO3P55854 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SUMO3P55854 AC108751.5-201ENST00000492880 1336 ntBASIC4.21□□□□□ -1.73
SUMO3P55854 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SUMO3P55854 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.21□□□□□ -1.73
SUMO3P55854 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SUMO3P55854 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 AC004925.1-201ENST00000624256 2706 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RN7SKP103-201ENST00000363848 320 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RNY1P12-201ENST00000364251 105 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RNY3P13-201ENST00000365542 102 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 SNORA20.2-201ENST00000383922 131 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RNU6-629P-201ENST00000384061 103 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RNA5SP397-201ENST00000391323 118 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 EI24P1-201ENST00000416584 867 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SUMO3P55854 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 TIMM9P3-201ENST00000428659 274 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RPL34P6-201ENST00000432390 345 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 FCF1P1-201ENST00000432690 571 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 USP9YP7-201ENST00000436723 430 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 MTATP6P13-201ENST00000438531 667 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 AL162591.2-201ENST00000449634 317 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 USP9YP32-201ENST00000452432 430 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AL513533.1-201ENST00000453728 415 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 ISCUP1-201ENST00000454451 448 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 SCARNA10-201ENST00000459255 330 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC021146.1-201ENST00000511202 716 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 OR7H2P-201ENST00000513483 306 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RNA5SP337-201ENST00000517007 109 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.21□□□□□ -1.74
SUMO3P55854 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.21□□□□□ -1.74
SUMO3P55854 DYNLL1P4-201ENST00000549314 266 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 AC124947.2-202ENST00000552735 133 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC008277.2-201ENST00000605196 797 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AP000860.1-201ENST00000605250 559 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC024940.4-201ENST00000605507 246 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SUMO3P55854 AL023881.1-201ENST00000621088 301 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AL049536.1-201ENST00000625043 744 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC019226.1-201ENST00000625666 515 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 AC108467.2-201ENST00000617640 1597 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SUMO3P55854 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
SUMO3P55854 NOL8P1-201ENST00000508336 3529 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms