Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC027807.1-201ENST00000559921 996 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.85□□□□□ -1.79
CDH12P55289 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH12P55289 AC053481.3-201ENST00000577881 843 ntBASIC3.85□□□□□ -1.79
CDH12P55289 MIR4715-201ENST00000584117 79 ntBASIC3.85□□□□□ -1.79
CDH12P55289 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 AC009977.1-201ENST00000586015 570 ntBASIC3.85□□□□□ -1.79
CDH12P55289 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH12P55289 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH12P55289 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 AL773545.4-201ENST00000637262 310 ntBASIC3.85□□□□□ -1.79
CDH12P55289 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 AC099654.13-201ENST00000639774 207 ntBASIC3.85□□□□□ -1.79
CDH12P55289 AL513478.4-201ENST00000641636 310 ntBASIC3.85□□□□□ -1.79
CDH12P55289 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CDH12P55289 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH12P55289 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 AL158163.1-201ENST00000603915 1649 ntBASIC3.84□□□□□ -1.79
CDH12P55289 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CDH12P55289 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 RNU1-14P-201ENST00000362759 152 ntBASIC3.84□□□□□ -1.79
CDH12P55289 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDH12P55289 CYB5AP4-201ENST00000396692 399 ntBASIC3.84□□□□□ -1.79
CDH12P55289 MTND4LP20-201ENST00000402379 270 ntBASIC3.84□□□□□ -1.79
CDH12P55289 UBE2V1P10-201ENST00000414685 269 ntBASIC3.84□□□□□ -1.79
CDH12P55289 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 OR8F1P-201ENST00000425243 930 ntBASIC3.84□□□□□ -1.79
CDH12P55289 BX890604.2-201ENST00000427883 474 ntBASIC3.84□□□□□ -1.79
CDH12P55289 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 SDCBPP1-201ENST00000440192 890 ntBASIC3.84□□□□□ -1.79
CDH12P55289 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.84□□□□□ -1.79
CDH12P55289 FAM103A2P-201ENST00000444122 354 ntBASIC3.84□□□□□ -1.79
CDH12P55289 NANOGNBP1-201ENST00000448444 480 ntBASIC3.84□□□□□ -1.79
CDH12P55289 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH12P55289 RPL9P33-201ENST00000484311 566 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AP001025.2-201ENST00000490908 477 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AL592156.1-201ENST00000508758 304 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AF213884.2-201ENST00000510417 903 ntBASIC3.84□□□□□ -1.79
CDH12P55289 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH12P55289 RN7SKP298-201ENST00000515950 94 ntBASIC3.84□□□□□ -1.79
CDH12P55289 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.84□□□□□ -1.79
CDH12P55289 RNU6-1003P-201ENST00000517099 105 ntBASIC3.84□□□□□ -1.79
CDH12P55289 RN7SKP234-201ENST00000517173 224 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH12P55289 AC016957.1-201ENST00000534895 309 ntBASIC3.84□□□□□ -1.79
CDH12P55289 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH12P55289 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH12P55289 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH12P55289 MIR3913-1-201ENST00000577744 102 ntBASIC3.84□□□□□ -1.79
CDH12P55289 TPMTP1-201ENST00000592307 737 ntBASIC3.84□□□□□ -1.79
CDH12P55289 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH12P55289 AP003465.2-201ENST00000602571 373 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AC008250.2-201ENST00000615261 205 ntBASIC3.84□□□□□ -1.79
CDH12P55289 AC095031.1-201ENST00000623685 672 ntBASIC3.84□□□□□ -1.79
CDH12P55289 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDH12P55289 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH12P55289 AC012618.3-205ENST00000637896 1496 ntBASIC3.84□□□□□ -1.8
CDH12P55289 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.84□□□□□ -1.8
CDH12P55289 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.8
CDH12P55289 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH12P55289 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH12P55289 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH12P55289 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH12P55289 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDH12P55289 RNA5SP447-201ENST00000363749 119 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RNU6-853P-201ENST00000364306 107 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RNU6-259P-201ENST00000383999 107 ntBASIC3.83□□□□□ -1.8
CDH12P55289 RNU6-1042P-201ENST00000384204 107 ntBASIC3.83□□□□□ -1.8
CDH12P55289 U3.29-201ENST00000391296 212 ntBASIC3.83□□□□□ -1.8
CDH12P55289 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms