Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
NUBP1P53384 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NUBP1P53384 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NUBP1P53384 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.89□□□□□ -1.31
NUBP1P53384 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NUBP1P53384 RNU6-147P-201ENST00000383983 107 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 SNORA68-201ENST00000384437 133 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 MTHFD2P2-201ENST00000407725 247 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 RNU6-1245P-201ENST00000411130 106 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.89□□□□□ -1.31
NUBP1P53384 NDUFB4P7-201ENST00000423198 363 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.89□□□□□ -1.31
NUBP1P53384 RN7SL216P-201ENST00000471607 298 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 SNRPCP6-201ENST00000528310 210 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AC021006.3-201ENST00000530771 192 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 UBE2Q2P8-201ENST00000560644 102 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 AL590032.1-201ENST00000604920 252 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AL355333.1-201ENST00000605632 279 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 AC024884.1-201ENST00000620583 399 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AL354798.1-201ENST00000622505 329 ntBASIC6.89□□□□□ -1.31
NUBP1P53384 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NUBP1P53384 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
NUBP1P53384 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NUBP1P53384 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NUBP1P53384 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
NUBP1P53384 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 AL391666.1-201ENST00000442570 2764 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUBP1P53384 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC6.88□□□□□ -1.31
NUBP1P53384 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.88□□□□□ -1.31
NUBP1P53384 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.88□□□□□ -1.31
NUBP1P53384 AL391361.1-201ENST00000405580 489 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC6.88□□□□□ -1.31
NUBP1P53384 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.88□□□□□ -1.31
NUBP1P53384 RNU6-572P-201ENST00000516724 80 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC069294.1-201ENST00000608397 350 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 AC092628.2-201ENST00000622492 339 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 AL034408.1-202ENST00000636088 415 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.88□□□□□ -1.31
NUBP1P53384 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NUBP1P53384 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.88□□□□□ -1.31
NUBP1P53384 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 CUL1P1-201ENST00000509510 2425 ntBASIC6.88□□□□□ -1.31
NUBP1P53384 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NUBP1P53384 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms