Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR21-201ENST00000362134 72 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A5P29400 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 RPL31P45-201ENST00000419532 356 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AC093084.1-201ENST00000424233 687 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A5P29400 MTATP6P11-201ENST00000428071 670 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A5P29400 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A5P29400 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 MIR8070-201ENST00000616510 88 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AC090229.1-201ENST00000590983 1609 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AC002543.1-201ENST00000299783 1954 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A5P29400 RNU1-17P-201ENST00000363022 152 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
COL4A5P29400 RPS15AP6-201ENST00000420703 385 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AL035551.1-201ENST00000446931 348 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 POU5F1P7-201ENST00000508759 541 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 RNU6-295P-201ENST00000516901 104 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A5P29400 AC234775.3-201ENST00000564612 656 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 AC012182.1-201ENST00000570133 895 ntBASIC2.69□□□□□ -1.98
COL4A5P29400 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A5P29400 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 AC009501.3-201ENST00000605001 1352 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 OR5H15-201ENST00000383696 930 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.68□□□□□ -1.98
COL4A5P29400 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.68□□□□□ -1.98
COL4A5P29400 AC073136.2-201ENST00000417282 849 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.68□□□□□ -1.98
COL4A5P29400 AC007677.1-201ENST00000445757 515 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
COL4A5P29400 XKRY-201ENST00000510392 1100 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 RN7SKP82-201ENST00000516786 223 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 RNA5SP380-201ENST00000517190 98 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 RFPL1S-203ENST00000539579 330 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 AC135628.1-201ENST00000568867 534 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 AC023043.2-201ENST00000589678 1026 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 AL356266.1-201ENST00000623311 483 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL4A5P29400 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.68□□□□□ -1.98
COL4A5P29400 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A5P29400 WWP1P1-201ENST00000466609 2769 ntBASIC2.68□□□□□ -1.98
COL4A5P29400 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A5P29400 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
COL4A5P29400 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.67□□□□□ -1.98
COL4A5P29400 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A5P29400 HSPD1P16-201ENST00000402302 394 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 RNU2-6P-201ENST00000411404 190 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 AL450263.2-201ENST00000439400 589 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A5P29400 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A5P29400 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A5P29400 HSPE1P18-201ENST00000517602 280 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.67□□□□□ -1.98
COL4A5P29400 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.67□□□□□ -1.98
COL4A5P29400 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A5P29400 AC090695.1-201ENST00000561269 1222 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 BMS1P7-201ENST00000602440 1052 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
COL4A5P29400 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A5P29400 AL359893.1-201ENST00000447628 1580 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.67□□□□□ -1.98
COL4A5P29400 AC025125.1-201ENST00000624743 1922 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 AC008432.1-201ENST00000615912 1320 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 AC093908.1-201ENST00000623125 8092 ntBASIC2.67□□□□□ -1.98
COL4A5P29400 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A5P29400 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL4A5P29400 HMGB1P11-201ENST00000413899 637 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 RAB9AP5-201ENST00000437794 597 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 RAB9AP2-201ENST00000443911 597 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A5P29400 RNU6-1053P-201ENST00000515930 101 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 SCARNA16.3-201ENST00000516595 184 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 RNU4-18P-201ENST00000516751 149 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A5P29400 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A5P29400 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A5P29400 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A5P29400 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A5P29400 MIR219B-201ENST00000637023 88 ntBASIC2.66□□□□□ -1.98
COL4A5P29400 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A5P29400 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A5P29400 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COL4A5P29400 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL4A5P29400 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms