Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.69□□□□□ -1.82
CFTRP13569 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.69□□□□□ -1.82
CFTRP13569 AL359198.2-201ENST00000611836 194 ntBASIC3.69□□□□□ -1.82
CFTRP13569 AL450489.1-201ENST00000612071 468 ntBASIC3.69□□□□□ -1.82
CFTRP13569 MIR6132-201ENST00000622083 109 ntBASIC3.69□□□□□ -1.82
CFTRP13569 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CFTRP13569 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CFTRP13569 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.69□□□□□ -1.82
CFTRP13569 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 RNU6-14P-201ENST00000384630 106 ntBASIC3.68□□□□□ -1.82
CFTRP13569 GSTA12P-201ENST00000402398 508 ntBASIC3.68□□□□□ -1.82
CFTRP13569 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.68□□□□□ -1.82
CFTRP13569 RPS26P30-201ENST00000443431 335 ntBASIC3.68□□□□□ -1.82
CFTRP13569 AL118520.1-201ENST00000450770 291 ntBASIC3.68□□□□□ -1.82
CFTRP13569 AC107015.1-201ENST00000466902 747 ntBASIC3.68□□□□□ -1.82
CFTRP13569 RNU6-1053P-201ENST00000515930 101 ntBASIC3.68□□□□□ -1.82
CFTRP13569 RFPL1S-203ENST00000539579 330 ntBASIC3.68□□□□□ -1.82
CFTRP13569 PDCD5P1-201ENST00000543528 309 ntBASIC3.68□□□□□ -1.82
CFTRP13569 AC087468.1-201ENST00000604365 630 ntBASIC3.68□□□□□ -1.82
CFTRP13569 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.68□□□□□ -1.82
CFTRP13569 AL606537.1-201ENST00000607258 2011 ntBASIC3.68□□□□□ -1.82
CFTRP13569 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CFTRP13569 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.67□□□□□ -1.82
CFTRP13569 MTCYBP19-201ENST00000517463 1124 ntBASIC3.67□□□□□ -1.82
CFTRP13569 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.67□□□□□ -1.82
CFTRP13569 GNAI2P1-201ENST00000541815 315 ntBASIC3.67□□□□□ -1.82
CFTRP13569 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.67□□□□□ -1.82
CFTRP13569 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.67□□□□□ -1.82
CFTRP13569 GMCL1P2-201ENST00000605230 823 ntBASIC3.67□□□□□ -1.82
CFTRP13569 CU459211.1-201ENST00000635667 749 ntBASIC3.67□□□□□ -1.82
CFTRP13569 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.67□□□□□ -1.82
CFTRP13569 OR5H15-201ENST00000383696 930 ntBASIC3.67□□□□□ -1.82
CFTRP13569 MIR1287-201ENST00000408492 90 ntBASIC3.67□□□□□ -1.82
CFTRP13569 RNU6-321P-201ENST00000410912 106 ntBASIC3.67□□□□□ -1.82
CFTRP13569 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CFTRP13569 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.67□□□□□ -1.82
CFTRP13569 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.67□□□□□ -1.82
CFTRP13569 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.67□□□□□ -1.82
CFTRP13569 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.67□□□□□ -1.82
CFTRP13569 AC128687.1-201ENST00000605304 619 ntBASIC3.67□□□□□ -1.82
CFTRP13569 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.67□□□□□ -1.82
CFTRP13569 OR10AB1P-202ENST00000641219 1686 ntBASIC3.66□□□□□ -1.82
CFTRP13569 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFTRP13569 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CFTRP13569 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CFTRP13569 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CFTRP13569 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CFTRP13569 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CFTRP13569 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.66□□□□□ -1.82
CFTRP13569 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.66□□□□□ -1.82
CFTRP13569 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.66□□□□□ -1.82
CFTRP13569 AL035551.1-201ENST00000446931 348 ntBASIC3.66□□□□□ -1.82
CFTRP13569 AC004263.1-201ENST00000479327 332 ntBASIC3.66□□□□□ -1.82
CFTRP13569 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.66□□□□□ -1.82
CFTRP13569 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.66□□□□□ -1.82
CFTRP13569 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.66□□□□□ -1.82
CFTRP13569 AMZ2P1-203ENST00000565833 850 ntBASIC3.66□□□□□ -1.82
CFTRP13569 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.66□□□□□ -1.82
CFTRP13569 AL645944.1-201ENST00000603857 493 ntBASIC3.66□□□□□ -1.82
CFTRP13569 AC002076.2-201ENST00000617362 122 ntBASIC3.66□□□□□ -1.82
CFTRP13569 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CFTRP13569 AL161431.1-201ENST00000618966 4205 ntBASIC3.65□□□□□ -1.82
CFTRP13569 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.65□□□□□ -1.83
CFTRP13569 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.65□□□□□ -1.83
CFTRP13569 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CFTRP13569 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.65□□□□□ -1.83
CFTRP13569 MIR4781-201ENST00000585250 76 ntBASIC3.65□□□□□ -1.83
CFTRP13569 AC023043.2-201ENST00000589678 1026 ntBASIC3.65□□□□□ -1.83
CFTRP13569 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CFTRP13569 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.64□□□□□ -1.83
CFTRP13569 AL512430.2-201ENST00000406786 339 ntBASIC3.64□□□□□ -1.83
CFTRP13569 SPA17P1-201ENST00000416656 452 ntBASIC3.64□□□□□ -1.83
CFTRP13569 AP000893.1-201ENST00000474462 794 ntBASIC3.64□□□□□ -1.83
CFTRP13569 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CFTRP13569 AL391813.2-201ENST00000609113 322 ntBASIC3.64□□□□□ -1.83
CFTRP13569 AC107294.3-201ENST00000609211 526 ntBASIC3.64□□□□□ -1.83
CFTRP13569 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.64□□□□□ -1.83
CFTRP13569 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CFTRP13569 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.64□□□□□ -1.83
CFTRP13569 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CFTRP13569 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CFTRP13569 MTND4P35-201ENST00000604257 1375 ntBASIC3.63□□□□□ -1.83
CFTRP13569 EXTL2P1-201ENST00000446218 416 ntBASIC3.63□□□□□ -1.83
CFTRP13569 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.63□□□□□ -1.83
CFTRP13569 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.63□□□□□ -1.83
CFTRP13569 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.63□□□□□ -1.83
CFTRP13569 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.63□□□□□ -1.83
CFTRP13569 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.63□□□□□ -1.83
CFTRP13569 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.63□□□□□ -1.83
CFTRP13569 MTND5P27-201ENST00000428871 1720 ntBASIC3.62□□□□□ -1.83
CFTRP13569 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CFTRP13569 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.62□□□□□ -1.83
CFTRP13569 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.62□□□□□ -1.83
CFTRP13569 AP003499.2-201ENST00000624100 483 ntBASIC3.62□□□□□ -1.83
CFTRP13569 AC016542.2-201ENST00000624201 619 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms