Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AK3P4-201ENST00000504283 583 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.718-201ENST00000517110 102 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RN7SKP256-201ENST00000517201 314 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC026464.5-201ENST00000562497 722 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC090615.1-201ENST00000577519 154 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC008782.1-201ENST00000603386 430 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC010591.1-201ENST00000603941 649 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AC084781.2-201ENST00000615568 161 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 AL133216.2-202ENST00000634512 349 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 RIOK3P1-201ENST00000418778 1528 ntBASIC6.66□□□□□ -1.34
CSB-PGBD3P0DP91 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 NACAP2-201ENST00000318548 624 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-1207P-201ENST00000384343 107 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-308P-201ENST00000390957 107 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 MTCO2P27-201ENST00000420740 428 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 SRIP2-201ENST00000428470 166 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 CBX3P6-201ENST00000430257 527 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 ATP5JP1-201ENST00000431631 322 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 NRBF2P3-201ENST00000432731 865 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 RPL7P52-201ENST00000449200 742 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AP001992.1-205ENST00000462248 379 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC010587.1-201ENST00000505809 469 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC093815.1-201ENST00000508637 280 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 KLHL2P1-201ENST00000508691 521 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC093853.1-201ENST00000515689 483 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 SNORD60.2-201ENST00000516883 86 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 MIR3118-1-201ENST00000581787 76 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 MIR6853-201ENST00000619642 74 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 AC091953.2-201ENST00000623979 160 ntBASIC6.65□□□□□ -1.34
CSB-PGBD3P0DP91 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 AC007529.1-201ENST00000418574 2178 ntBASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 MTND4P1-201ENST00000457501 1466 ntBASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 AC138907.8-201ENST00000623981 2256 ntBASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CSB-PGBD3P0DP91 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 MUC2-202ENST00000613187 4845 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 Y_RNA.234-201ENST00000364409 97 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC009161.1-201ENST00000417306 376 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 BEND7P1-201ENST00000422058 457 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 SNRPEP4-201ENST00000435815 279 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC005154.2-201ENST00000438110 379 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 CACYBPP2-201ENST00000453625 678 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC091180.1-201ENST00000462104 372 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC233702.1-201ENST00000482905 502 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC016065.2-201ENST00000514530 444 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC105417.1-201ENST00000514691 285 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-559P-201ENST00000516151 98 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-1137P-201ENST00000517073 99 ntBASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CSB-PGBD3P0DP91 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms