Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
MMP3P08254 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
MMP3P08254 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.15□□□□□ -1.74
MMP3P08254 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
MMP3P08254 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 U3.4-201ENST00000363352 213 ntBASIC4.15□□□□□ -1.75
MMP3P08254 MIR506-201ENST00000384998 124 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AL121972.1-201ENST00000402023 252 ntBASIC4.15□□□□□ -1.75
MMP3P08254 ZNF603P-201ENST00000405613 487 ntBASIC4.15□□□□□ -1.75
MMP3P08254 RPL23AP48-201ENST00000406913 488 ntBASIC4.15□□□□□ -1.75
MMP3P08254 RNA5SP146-201ENST00000410743 123 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 AL953862.1-201ENST00000423016 168 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.15□□□□□ -1.75
MMP3P08254 EPS15P1-201ENST00000448836 336 ntBASIC4.15□□□□□ -1.75
MMP3P08254 RPL36AP33-201ENST00000450395 310 ntBASIC4.15□□□□□ -1.75
MMP3P08254 SNORD105B-201ENST00000458770 79 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC010301.1-201ENST00000473936 355 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC087879.1-201ENST00000474343 374 ntBASIC4.15□□□□□ -1.75
MMP3P08254 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
MMP3P08254 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 RN7SKP13-201ENST00000515933 244 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.15□□□□□ -1.75
MMP3P08254 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.15□□□□□ -1.75
MMP3P08254 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
MMP3P08254 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.15□□□□□ -1.75
MMP3P08254 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 AL596327.1-201ENST00000603629 213 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AL137849.1-201ENST00000604767 169 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC106028.5-201ENST00000610332 395 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC098679.4-201ENST00000624241 654 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AL392088.2-201ENST00000637607 285 ntBASIC4.15□□□□□ -1.75
MMP3P08254 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
MMP3P08254 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.75
MMP3P08254 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.15□□□□□ -1.75
MMP3P08254 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MMP3P08254 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
MMP3P08254 AC114546.3-201ENST00000623582 1734 ntBASIC4.15□□□□□ -1.75
MMP3P08254 AC012020.1-201ENST00000624541 1728 ntBASIC4.15□□□□□ -1.75
MMP3P08254 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.75
MMP3P08254 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.75
MMP3P08254 MTND4P26-201ENST00000415971 1359 ntBASIC4.14□□□□□ -1.75
MMP3P08254 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 AL049781.1-201ENST00000623195 3585 ntBASIC4.14□□□□□ -1.75
MMP3P08254 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 AC092104.1-201ENST00000497346 1441 ntBASIC4.14□□□□□ -1.75
MMP3P08254 PRO1804-201ENST00000623780 2050 ntBASIC4.14□□□□□ -1.75
MMP3P08254 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 RNU4-21P-201ENST00000362802 126 ntBASIC4.14□□□□□ -1.75
MMP3P08254 RNA5SP88-201ENST00000365560 109 ntBASIC4.14□□□□□ -1.75
MMP3P08254 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
MMP3P08254 MIR649-201ENST00000384843 97 ntBASIC4.14□□□□□ -1.75
MMP3P08254 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
MMP3P08254 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 CYCSP4-201ENST00000429682 331 ntBASIC4.14□□□□□ -1.75
MMP3P08254 MED14P1-201ENST00000430517 648 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC023347.2-201ENST00000433994 462 ntBASIC4.14□□□□□ -1.75
MMP3P08254 RPL39P6-201ENST00000448289 150 ntBASIC4.14□□□□□ -1.75
MMP3P08254 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 MTCO3P11-201ENST00000455103 774 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC109486.1-201ENST00000486833 374 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 AC090071.1-201ENST00000507713 644 ntBASIC4.14□□□□□ -1.75
MMP3P08254 MTCO3P7-201ENST00000510008 774 ntBASIC4.14□□□□□ -1.75
MMP3P08254 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 AC239860.2-201ENST00000525886 270 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.14□□□□□ -1.75
MMP3P08254 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.14□□□□□ -1.75
MMP3P08254 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.14□□□□□ -1.75
MMP3P08254 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.14□□□□□ -1.75
MMP3P08254 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.14□□□□□ -1.75
MMP3P08254 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.14□□□□□ -1.75
MMP3P08254 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 AL133457.1-201ENST00000564251 987 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC022146.1-201ENST00000595307 847 ntBASIC4.14□□□□□ -1.75
MMP3P08254 VN1R92P-201ENST00000598511 928 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC010591.1-201ENST00000603941 649 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC064872.1-201ENST00000604823 1072 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC090425.2-201ENST00000608818 501 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC090116.1-201ENST00000615679 446 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC127502.3-201ENST00000636170 1206 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AC244258.1-201ENST00000637553 1071 ntBASIC4.14□□□□□ -1.75
MMP3P08254 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
MMP3P08254 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MMP3P08254 AC007823.1-201ENST00000569932 1566 ntBASIC4.14□□□□□ -1.75
MMP3P08254 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
MMP3P08254 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms