Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 AC244205.2-202ENST00000635781 342 ntBASIC4.36□□□□□ -1.71
DDX58O95786 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.36□□□□□ -1.71
DDX58O95786 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 MTCO1P23-201ENST00000415223 1526 ntBASIC4.36□□□□□ -1.71
DDX58O95786 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 AC008725.1-201ENST00000605123 2263 ntBASIC4.35□□□□□ -1.71
DDX58O95786 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX58O95786 AL356274.2-201ENST00000624379 3752 ntBASIC4.35□□□□□ -1.71
DDX58O95786 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX58O95786 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX58O95786 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC073346.2-201ENST00000624724 2058 ntBASIC4.35□□□□□ -1.71
DDX58O95786 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DDX58O95786 RNU6-989P-201ENST00000362756 107 ntBASIC4.35□□□□□ -1.71
DDX58O95786 RNU6-1249P-201ENST00000363237 111 ntBASIC4.35□□□□□ -1.71
DDX58O95786 RNU6-1181P-201ENST00000384191 106 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AL138880.1-201ENST00000405824 642 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AIMP1P1-201ENST00000418670 937 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC012065.2-201ENST00000421295 375 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC006548.1-201ENST00000427470 102 ntBASIC4.35□□□□□ -1.71
DDX58O95786 RPL23AP74-201ENST00000437246 471 ntBASIC4.35□□□□□ -1.71
DDX58O95786 NPM1P49-201ENST00000448027 714 ntBASIC4.35□□□□□ -1.71
DDX58O95786 OFD1P3Y-201ENST00000453312 783 ntBASIC4.35□□□□□ -1.71
DDX58O95786 RPS4XP10-201ENST00000465034 731 ntBASIC4.35□□□□□ -1.71
DDX58O95786 MTND1P16-201ENST00000465177 898 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC087312.1-201ENST00000471411 480 ntBASIC4.35□□□□□ -1.71
DDX58O95786 RPS3AP50-201ENST00000487064 803 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX58O95786 HMGB1P28-201ENST00000507778 552 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX58O95786 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX58O95786 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX58O95786 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX58O95786 BNIP3P38-201ENST00000601117 544 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX58O95786 AC092650.2-201ENST00000619984 902 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AC040168.1-201ENST00000623594 991 ntBASIC4.35□□□□□ -1.71
DDX58O95786 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
DDX58O95786 CR381572.1-201ENST00000625098 102 ntBASIC4.35□□□□□ -1.71
DDX58O95786 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX58O95786 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX58O95786 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
DDX58O95786 AC032011.1-201ENST00000611703 1549 ntBASIC4.35□□□□□ -1.71
DDX58O95786 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
DDX58O95786 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX58O95786 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX58O95786 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DDX58O95786 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
DDX58O95786 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DDX58O95786 SNRPEP3-201ENST00000338402 276 ntBASIC4.34□□□□□ -1.71
DDX58O95786 RNA5SP80-201ENST00000410475 111 ntBASIC4.34□□□□□ -1.71
DDX58O95786 BX323014.1-201ENST00000412876 237 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX58O95786 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.34□□□□□ -1.71
DDX58O95786 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AL138799.3-201ENST00000438968 350 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 ELOCP13-201ENST00000443934 329 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX58O95786 AL357552.1-201ENST00000445254 415 ntBASIC4.34□□□□□ -1.71
DDX58O95786 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX58O95786 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.34□□□□□ -1.71
DDX58O95786 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 MTCYBP41-201ENST00000528913 1123 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX58O95786 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.34□□□□□ -1.71
DDX58O95786 HIGD1AP17-201ENST00000554576 276 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.34□□□□□ -1.71
DDX58O95786 MTND4P33-201ENST00000556706 766 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC090695.1-201ENST00000561269 1222 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC020914.4-201ENST00000597690 277 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC068790.5-201ENST00000602741 355 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AL161756.2-201ENST00000604597 246 ntBASIC4.34□□□□□ -1.71
DDX58O95786 HMGB1P50-201ENST00000605814 607 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AL451074.6-201ENST00000608512 729 ntBASIC4.34□□□□□ -1.71
DDX58O95786 AC022149.2-201ENST00000621061 203 ntBASIC4.34□□□□□ -1.71
DDX58O95786 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX58O95786 AC006963.1-201ENST00000624003 1052 ntBASIC4.34□□□□□ -1.71
DDX58O95786 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.34□□□□□ -1.71
DDX58O95786 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DDX58O95786 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DDX58O95786 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
DDX58O95786 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DDX58O95786 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DDX58O95786 RNA5SP258-201ENST00000362750 119 ntBASIC4.33□□□□□ -1.72
DDX58O95786 RNU6-878P-201ENST00000384578 110 ntBASIC4.33□□□□□ -1.72
DDX58O95786 MIR513B-201ENST00000385136 84 ntBASIC4.33□□□□□ -1.72
DDX58O95786 U3.19-201ENST00000390893 196 ntBASIC4.33□□□□□ -1.72
DDX58O95786 RNU2-15P-201ENST00000410692 191 ntBASIC4.33□□□□□ -1.72
DDX58O95786 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.33□□□□□ -1.72
DDX58O95786 GLRXP1-201ENST00000423261 334 ntBASIC4.33□□□□□ -1.72
DDX58O95786 AC005326.1-201ENST00000429197 123 ntBASIC4.33□□□□□ -1.72
DDX58O95786 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms