Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 AC007496.3-201ENST00000624987 3443 ntBASIC3.17□□□□□ -1.9
HCN1O60741 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HCN1O60741 RNA5SP267-201ENST00000364893 126 ntBASIC3.17□□□□□ -1.9
HCN1O60741 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HCN1O60741 BOLA3P4-201ENST00000418151 400 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AC104308.1-201ENST00000454621 333 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN1O60741 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 AC084024.2-201ENST00000503480 791 ntBASIC3.17□□□□□ -1.9
HCN1O60741 KCTD9P5-201ENST00000504141 1170 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.17□□□□□ -1.9
HCN1O60741 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 RNU6-1028P-201ENST00000517164 93 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN1O60741 AC093519.1-201ENST00000566109 298 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.17□□□□□ -1.9
HCN1O60741 AL606834.3-201ENST00000602615 496 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AL445435.1-201ENST00000604232 665 ntBASIC3.17□□□□□ -1.9
HCN1O60741 AC012468.1-201ENST00000604888 430 ntBASIC3.17□□□□□ -1.9
HCN1O60741 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.17□□□□□ -1.9
HCN1O60741 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN1O60741 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN1O60741 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.16□□□□□ -1.9
HCN1O60741 ZNF734P-201ENST00000419494 1534 ntBASIC3.16□□□□□ -1.9
HCN1O60741 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.16□□□□□ -1.9
HCN1O60741 RNU6-251P-201ENST00000363235 104 ntBASIC3.16□□□□□ -1.9
HCN1O60741 Y_RNA.493-201ENST00000384422 102 ntBASIC3.16□□□□□ -1.9
HCN1O60741 RNVU1-14-201ENST00000384770 164 ntBASIC3.16□□□□□ -1.9
HCN1O60741 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
HCN1O60741 MT-TC-201ENST00000387405 66 ntBASIC3.16□□□□□ -1.9
HCN1O60741 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HCN1O60741 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 RPL23AP82-202ENST00000427528 469 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
HCN1O60741 SDR42E1P3-201ENST00000438345 502 ntBASIC3.16□□□□□ -1.9
HCN1O60741 RPS3AP12-201ENST00000443616 753 ntBASIC3.16□□□□□ -1.9
HCN1O60741 RPL17P49-201ENST00000443728 411 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 AC104978.1-201ENST00000449387 391 ntBASIC3.16□□□□□ -1.9
HCN1O60741 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
HCN1O60741 CENPBD1P1-201ENST00000464061 469 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC010285.1-201ENST00000470580 392 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC104982.1-201ENST00000478775 574 ntBASIC3.16□□□□□ -1.9
HCN1O60741 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HCN1O60741 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HCN1O60741 AC093752.1-206ENST00000511823 336 ntBASIC3.16□□□□□ -1.9
HCN1O60741 SNORA19.3-201ENST00000516165 130 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.16□□□□□ -1.9
HCN1O60741 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.16□□□□□ -1.9
HCN1O60741 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
HCN1O60741 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC113368.1-201ENST00000603736 382 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AL592148.2-201ENST00000612210 372 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC090116.1-201ENST00000615679 446 ntBASIC3.16□□□□□ -1.9
HCN1O60741 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
HCN1O60741 U4.6-201ENST00000621618 127 ntBASIC3.16□□□□□ -1.9
HCN1O60741 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.16□□□□□ -1.9
HCN1O60741 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
HCN1O60741 AC087821.2-201ENST00000637086 450 ntBASIC3.16□□□□□ -1.9
HCN1O60741 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.16□□□□□ -1.9
HCN1O60741 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCN1O60741 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCN1O60741 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.16□□□□□ -1.9
HCN1O60741 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HCN1O60741 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.9
HCN1O60741 AC130650.2-201ENST00000618736 2403 ntBASIC3.15□□□□□ -1.9
HCN1O60741 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.9
HCN1O60741 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.9
HCN1O60741 FRG1CP-201ENST00000358464 769 ntBASIC3.15□□□□□ -1.91
HCN1O60741 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
HCN1O60741 RNU6-707P-201ENST00000364647 95 ntBASIC3.15□□□□□ -1.91
HCN1O60741 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.15□□□□□ -1.91
HCN1O60741 U3.19-201ENST00000390893 196 ntBASIC3.15□□□□□ -1.91
HCN1O60741 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
HCN1O60741 TMSB4XP8-201ENST00000402089 135 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AL354719.1-201ENST00000406535 843 ntBASIC3.15□□□□□ -1.91
HCN1O60741 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.15□□□□□ -1.91
HCN1O60741 RNU4-65P-201ENST00000410473 140 ntBASIC3.15□□□□□ -1.91
HCN1O60741 TMSB4XP6-201ENST00000415187 135 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.15□□□□□ -1.91
HCN1O60741 AC092634.6-201ENST00000418558 192 ntBASIC3.15□□□□□ -1.91
HCN1O60741 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.15□□□□□ -1.91
HCN1O60741 TMSB4XP1-201ENST00000424567 135 ntBASIC3.15□□□□□ -1.91
HCN1O60741 AL035410.1-201ENST00000427409 427 ntBASIC3.15□□□□□ -1.91
HCN1O60741 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms