Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
URB1O60287 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.15□□□□□ -2.07
URB1O60287 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.15□□□□□ -2.07
URB1O60287 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
URB1O60287 Z82205.1-201ENST00000428456 297 ntBASIC2.15□□□□□ -2.07
URB1O60287 MTCYBP14-201ENST00000457471 715 ntBASIC2.15□□□□□ -2.07
URB1O60287 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
URB1O60287 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.15□□□□□ -2.07
URB1O60287 AC119751.1-201ENST00000513357 765 ntBASIC2.15□□□□□ -2.07
URB1O60287 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
URB1O60287 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.15□□□□□ -2.07
URB1O60287 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
URB1O60287 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.15□□□□□ -2.07
URB1O60287 Z99129.2-201ENST00000619967 314 ntBASIC2.15□□□□□ -2.07
URB1O60287 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
URB1O60287 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
URB1O60287 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.14□□□□□ -2.07
URB1O60287 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.14□□□□□ -2.07
URB1O60287 MTND5P29-201ENST00000458676 1807 ntBASIC2.14□□□□□ -2.07
URB1O60287 MTCO1P14-201ENST00000441695 1559 ntBASIC2.14□□□□□ -2.07
URB1O60287 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
URB1O60287 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
URB1O60287 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.14□□□□□ -2.07
URB1O60287 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
URB1O60287 SPA17P1-201ENST00000416656 452 ntBASIC2.14□□□□□ -2.07
URB1O60287 RPL23AP74-201ENST00000437246 471 ntBASIC2.14□□□□□ -2.07
URB1O60287 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.14□□□□□ -2.07
URB1O60287 MRPL50P4-201ENST00000446432 475 ntBASIC2.14□□□□□ -2.07
URB1O60287 AC126182.1-201ENST00000478134 357 ntBASIC2.14□□□□□ -2.07
URB1O60287 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.14□□□□□ -2.07
URB1O60287 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.14□□□□□ -2.07
URB1O60287 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.14□□□□□ -2.07
URB1O60287 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.14□□□□□ -2.07
URB1O60287 AC067852.7-201ENST00000623270 535 ntBASIC2.14□□□□□ -2.07
URB1O60287 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.14□□□□□ -2.07
URB1O60287 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
URB1O60287 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
URB1O60287 AC138915.3-201ENST00000562908 1389 ntBASIC2.14□□□□□ -2.07
URB1O60287 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
URB1O60287 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.14□□□□□ -2.07
URB1O60287 AL606490.7-201ENST00000433136 191 ntBASIC2.14□□□□□ -2.07
URB1O60287 TRIM60P18-201ENST00000441518 828 ntBASIC2.14□□□□□ -2.07
URB1O60287 MTND4LP12-201ENST00000448237 295 ntBASIC2.14□□□□□ -2.07
URB1O60287 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.14□□□□□ -2.07
URB1O60287 DYNLL1P6-201ENST00000503440 264 ntBASIC2.14□□□□□ -2.07
URB1O60287 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.14□□□□□ -2.07
URB1O60287 SCARNA17.1-201ENST00000516211 143 ntBASIC2.14□□□□□ -2.07
URB1O60287 SCARNA17.2-201ENST00000516334 143 ntBASIC2.14□□□□□ -2.07
URB1O60287 HMGB1P1-201ENST00000522557 636 ntBASIC2.14□□□□□ -2.07
URB1O60287 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
URB1O60287 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.14□□□□□ -2.07
URB1O60287 SCARNA17.4-201ENST00000614296 143 ntBASIC2.14□□□□□ -2.07
URB1O60287 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
URB1O60287 BX005019.1-201ENST00000561881 1810 ntBASIC2.13□□□□□ -2.07
URB1O60287 Y_RNA.116-201ENST00000363292 103 ntBASIC2.13□□□□□ -2.07
URB1O60287 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.13□□□□□ -2.07
URB1O60287 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
URB1O60287 NPM1P10-201ENST00000398310 865 ntBASIC2.13□□□□□ -2.07
URB1O60287 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.13□□□□□ -2.07
URB1O60287 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.13□□□□□ -2.07
URB1O60287 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.13□□□□□ -2.07
URB1O60287 AC068339.2-201ENST00000534395 618 ntBASIC2.13□□□□□ -2.07
URB1O60287 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
URB1O60287 AC025260.1-201ENST00000548858 430 ntBASIC2.13□□□□□ -2.07
URB1O60287 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
URB1O60287 AL162233.1-201ENST00000620014 944 ntBASIC2.13□□□□□ -2.07
URB1O60287 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.13□□□□□ -2.07
URB1O60287 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
URB1O60287 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.13□□□□□ -2.07
URB1O60287 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
URB1O60287 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
URB1O60287 RNA5SP129-201ENST00000410276 118 ntBASIC2.12□□□□□ -2.07
URB1O60287 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.12□□□□□ -2.07
URB1O60287 SEC63P1-201ENST00000425785 1258 ntBASIC2.12□□□□□ -2.07
URB1O60287 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.12□□□□□ -2.07
URB1O60287 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.12□□□□□ -2.07
URB1O60287 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.12□□□□□ -2.07
URB1O60287 RPL36AP51-201ENST00000487216 318 ntBASIC2.12□□□□□ -2.07
URB1O60287 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.12□□□□□ -2.07
URB1O60287 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.12□□□□□ -2.07
URB1O60287 AL670379.6-201ENST00000603753 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.11-201ENST00000604059 253 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.10-201ENST00000604330 253 ntBASIC2.12□□□□□ -2.07
URB1O60287 AC008162.1-201ENST00000604718 254 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.1-201ENST00000604752 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.2-201ENST00000604983 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.5-201ENST00000605253 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.4-201ENST00000605279 254 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.12-201ENST00000605291 253 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.8-201ENST00000605353 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.9-201ENST00000605428 253 ntBASIC2.12□□□□□ -2.07
URB1O60287 AL670379.7-201ENST00000605823 252 ntBASIC2.12□□□□□ -2.07
URB1O60287 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
URB1O60287 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
URB1O60287 RNY1P10-201ENST00000363268 113 ntBASIC2.12□□□□□ -2.07
URB1O60287 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.12□□□□□ -2.07
URB1O60287 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.12□□□□□ -2.07
URB1O60287 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.12□□□□□ -2.07
URB1O60287 AP000926.1-201ENST00000479573 241 ntBASIC2.12□□□□□ -2.07
URB1O60287 SNORA70.14-201ENST00000516205 110 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms