Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
RIPK2O43353 MTCO1P23-201ENST00000415223 1526 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIPK2O43353 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIPK2O43353 AC011460.1-201ENST00000636268 1834 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIPK2O43353 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.29□□□□□ -1.88
RIPK2O43353 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.29□□□□□ -1.88
RIPK2O43353 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.29□□□□□ -1.88
RIPK2O43353 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RIPK2O43353 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.29□□□□□ -1.88
RIPK2O43353 MOB1AP2-201ENST00000446060 614 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 BOLA3P3-201ENST00000505182 232 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.29□□□□□ -1.88
RIPK2O43353 NPM1P41-201ENST00000512920 831 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.29□□□□□ -1.88
RIPK2O43353 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.29□□□□□ -1.88
RIPK2O43353 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RIPK2O43353 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 AC068339.2-201ENST00000534395 618 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.29□□□□□ -1.88
RIPK2O43353 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
RIPK2O43353 AC098483.2-201ENST00000603158 454 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 RPL23AP92-201ENST00000603609 255 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.29□□□□□ -1.88
RIPK2O43353 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 AL109620.1-201ENST00000618738 1197 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 AC006249.1-201ENST00000621223 471 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.29□□□□□ -1.88
RIPK2O43353 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
RIPK2O43353 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIPK2O43353 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 RN7SKP280-201ENST00000364196 304 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC068538.1-201ENST00000376856 336 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AL133264.1-201ENST00000407157 562 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 RNU2-15P-201ENST00000410692 191 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 AL137014.1-201ENST00000420490 1226 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC012498.1-201ENST00000424037 437 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 UBE2D3P3-201ENST00000426992 425 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 RPS12P18-201ENST00000442381 270 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 H2AFZP6-201ENST00000444403 394 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 AL359073.1-201ENST00000448036 403 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 BTF3P5-201ENST00000457252 467 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 CBX3P3-201ENST00000508108 532 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 APOOP4-201ENST00000513530 597 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 FAM60DP-201ENST00000524174 632 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 GTF2IP22-201ENST00000554443 182 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.28□□□□□ -1.88
RIPK2O43353 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
RIPK2O43353 AC022916.3-201ENST00000592961 742 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AP003973.1-201ENST00000604639 691 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC012443.1-201ENST00000605605 231 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC005014.3-201ENST00000605985 190 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AL136370.1-201ENST00000608166 691 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AL356585.4-201ENST00000623078 1229 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 AC093875.1-201ENST00000623688 504 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RIPK2O43353 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.28□□□□□ -1.88
RIPK2O43353 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RIPK2O43353 API5P2-201ENST00000397055 1498 ntBASIC3.28□□□□□ -1.88
RIPK2O43353 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
RIPK2O43353 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIPK2O43353 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RIPK2O43353 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
RIPK2O43353 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
RIPK2O43353 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RIPK2O43353 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
RIPK2O43353 RNU6-1155P-201ENST00000363554 107 ntBASIC3.27□□□□□ -1.89
RIPK2O43353 RNU1-64P-201ENST00000365443 163 ntBASIC3.27□□□□□ -1.89
RIPK2O43353 MIR493-201ENST00000385254 89 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms