Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.34□□□□□ -1.88
PDLIM1O00151 AC106754.1-201ENST00000562632 1513 ntBASIC3.34□□□□□ -1.88
PDLIM1O00151 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.88
PDLIM1O00151 AC130650.2-201ENST00000618736 2403 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
PDLIM1O00151 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 SUGT1P1-201ENST00000379514 476 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 Y_RNA.493-201ENST00000384422 102 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 RNU2-42P-201ENST00000410697 113 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC007435.1-201ENST00000421086 415 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL139247.1-201ENST00000422768 325 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 SDCBPP2-201ENST00000424643 885 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AL445584.1-201ENST00000431451 330 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM1O00151 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 TRIM60P18-201ENST00000441518 828 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.33□□□□□ -1.88
PDLIM1O00151 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 CDC27P1-201ENST00000445384 715 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM1O00151 RPL36AP33-201ENST00000450395 310 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
PDLIM1O00151 RN7SL542P-201ENST00000467147 294 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AP000563.1-201ENST00000490865 758 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM1O00151 RN7SKP157-201ENST00000516174 282 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 RN7SKP244-201ENST00000516513 307 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC104986.1-201ENST00000517978 436 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC087808.1-201ENST00000520501 361 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC007991.1-201ENST00000522680 631 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AP004371.1-201ENST00000525240 214 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AP000926.4-201ENST00000527351 454 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.33□□□□□ -1.88
PDLIM1O00151 SULT1C2P1-202ENST00000562418 459 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC034105.4-201ENST00000568304 277 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AC138915.2-201ENST00000569776 97 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 MIR3690-201ENST00000580266 75 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 VN1R83P-201ENST00000595685 445 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 AL035411.2-201ENST00000604022 421 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM1O00151 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM1O00151 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 ZNF37BP-203ENST00000452306 1352 ntBASIC3.33□□□□□ -1.88
PDLIM1O00151 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM1O00151 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM1O00151 RNU6-263P-201ENST00000363811 107 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDLIM1O00151 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AL354719.1-201ENST00000406535 843 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 RNU4-78P-201ENST00000410940 126 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 RN7SKP58-201ENST00000411010 305 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 MRPS36P1-201ENST00000421291 307 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC104332.2-201ENST00000429959 156 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC007389.2-201ENST00000434630 306 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AL662791.1-201ENST00000441992 928 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 DUXAP8-207ENST00000456786 622 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 PLGLA-201ENST00000465668 449 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC108734.3-201ENST00000481241 1165 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 OR4G11P-201ENST00000492842 939 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 MTCO3P44-201ENST00000510977 541 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 MTND4LP31-201ENST00000514859 294 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 MTCO2P32-201ENST00000514865 403 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.32□□□□□ -1.88
PDLIM1O00151 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM1O00151 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms