Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
MBD3L4A6NDZ8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
MBD3L4A6NDZ8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD3L4A6NDZ8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MBD3L4A6NDZ8 ADAM5-202ENST00000399789 1942 ntBASIC4.15□□□□□ -1.75
MBD3L4A6NDZ8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 OR14L1P-202ENST00000641545 3009 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-456P-201ENST00000384493 107 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AP000580.1-201ENST00000404439 358 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 BTF3P7-201ENST00000407097 488 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 SSXP9-201ENST00000417503 292 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RPL17P36-201ENST00000420302 549 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RGS17P1-201ENST00000423358 553 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 HMGN2P27-201ENST00000427352 270 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 NIP7P2-201ENST00000485801 544 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RPL7P23-201ENST00000493874 747 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC135721.1-201ENST00000497954 479 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC007016.1-201ENST00000512110 244 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-1220P-201ENST00000517126 108 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AP004371.1-201ENST00000525240 214 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 DEFB108D-201ENST00000527787 222 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AP001781.1-201ENST00000530977 207 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC084783.1-201ENST00000565846 910 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 SNORD84-203ENST00000584275 78 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC068790.5-201ENST00000602741 355 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 AC015813.6-201ENST00000624409 5808 ntBASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD3L4A6NDZ8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP479-201ENST00000364858 117 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 Y_RNA.372-201ENST00000365599 102 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 SDHCP2-201ENST00000398565 501 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 ARL4AP5-201ENST00000404372 599 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL590002.1-201ENST00000406554 418 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 RNU4-65P-201ENST00000410473 140 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 MTCO3P12-201ENST00000416718 547 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC244098.2-201ENST00000422068 99 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL139415.2-201ENST00000431968 163 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC132479.1-201ENST00000449160 144 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 NANOGP10-201ENST00000453325 895 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AL049714.1-201ENST00000466686 347 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC079382.1-201ENST00000493346 557 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP230-201ENST00000517039 122 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AP001893.2-201ENST00000526949 202 ntBASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
MBD3L4A6NDZ8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms