Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXD3Q9UJU5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC138907.8-201ENST00000623981 2256 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU1-150P-201ENST00000362491 162 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SNORD62.1-201ENST00000362541 86 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RN7SKP128-201ENST00000364270 303 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU1-115P-201ENST00000365329 160 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.404-201ENST00000383978 102 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU6-214P-201ENST00000384130 107 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SNORD3H-201ENST00000384486 214 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.527-201ENST00000384573 102 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU6-817P-201ENST00000391083 104 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 HMGB3P2-201ENST00000411913 584 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RPL35AP3-201ENST00000414680 288 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 USMG5P1-201ENST00000425964 177 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC093151.1-201ENST00000427711 313 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC023141.9-201ENST00000458734 412 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SNORD5.1-201ENST00000458800 75 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU6-953P-201ENST00000459154 107 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RPL5P30-201ENST00000465511 891 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 MTATP8P1-201ENST00000467115 207 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RPL31P60-201ENST00000478450 367 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNU6-470P-201ENST00000515954 104 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SNORA70.20-201ENST00000516848 126 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 GNAI2P1-201ENST00000541815 315 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AL355598.1-201ENST00000604169 202 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 IGHV3-29-201ENST00000604817 344 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AC010680.4-201ENST00000605334 543 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 AL049767.1-202ENST00000637826 242 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 THAP12P9-201ENST00000503971 2360 ntBASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXD3Q9UJU5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC020656.2-201ENST00000613291 5309 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RNA5SP211-201ENST00000365516 117 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RNU6-505P-201ENST00000384427 107 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 SNORA70E-201ENST00000384492 135 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RNU6-95P-201ENST00000384697 107 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 OR2AT2P-201ENST00000413438 905 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 Z99755.1-201ENST00000414048 380 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC080125.1-201ENST00000414888 684 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC079355.1-201ENST00000421770 223 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 NUP35P1-201ENST00000422734 947 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL590632.1-201ENST00000424289 371 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC008267.5-201ENST00000424928 265 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC096644.2-201ENST00000429278 159 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC090774.1-201ENST00000435925 246 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC004866.2-201ENST00000438285 481 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC064862.4-201ENST00000442180 334 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 snoU13.3-201ENST00000459441 104 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RPL37P6-201ENST00000460682 294 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 SNRPCP3-201ENST00000474888 476 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RPL21P103-201ENST00000479921 488 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 VN1R105P-201ENST00000486595 910 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 AC096745.1-201ENST00000509945 370 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 RN7SKP60-201ENST00000516985 239 ntBASIC5.3□□□□□ -1.56
FOXD3Q9UJU5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms