Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MIR128-1-201ENST00000384921 82 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 RPL23AP47-201ENST00000408017 460 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SFR1P2-201ENST00000421841 730 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL353678.1-201ENST00000422735 741 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC005517.2-201ENST00000424673 553 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 UBE2V1P6-201ENST00000430840 422 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 B3GNT2P1-201ENST00000434960 952 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 HMGN2P20-201ENST00000437531 273 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SEPT14P24-201ENST00000447236 180 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 HMGN3P1-201ENST00000453847 193 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 VN1R17P-201ENST00000472048 1090 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC010460.2-201ENST00000509054 677 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 RNU5A-7P-201ENST00000515979 116 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 OR8K4P-201ENST00000534608 872 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MTND1P8-201ENST00000571424 950 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MTCO1P40-201ENST00000574371 625 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC016877.3-201ENST00000606778 504 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC013468.1-201ENST00000608680 598 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AL157817.1-201ENST00000614264 790 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SRP72P2-201ENST00000344851 1979 ntBASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLIP2Q9UDT6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 ZNF833P-201ENST00000424938 1494 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RNU6-619P-201ENST00000365146 108 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 U6.112-201ENST00000384129 70 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RPL17P50-201ENST00000396131 546 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 HMGB3P23-201ENST00000414981 585 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC091390.3-201ENST00000426478 338 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 FO393414.1-201ENST00000428697 1184 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 MTCYBP15-201ENST00000433123 1127 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC000041.1-201ENST00000439655 175 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 HMGB3P11-201ENST00000440127 604 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL671855.1-201ENST00000446875 1203 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RNU7-140P-201ENST00000459546 60 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RNF138P1-201ENST00000502765 546 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL132657.2-201ENST00000564417 358 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 SNORD39.4-201ENST00000620099 78 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AP000943.4-201ENST00000622912 357 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 AL121594.5-201ENST00000631724 573 ntBASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP2Q9UDT6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 MTND5P31-201ENST00000419366 1374 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 SNORA63.3-201ENST00000362682 132 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP2Q9UDT6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms