Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC012213.3-201ENST00000577199 777 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 VN1R92P-201ENST00000598511 928 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AL031775.1-201ENST00000607014 887 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 MIR6810-201ENST00000622701 70 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC092184.1-201ENST00000625042 715 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC127502.3-201ENST00000636170 1206 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 AC090582.1-201ENST00000636321 199 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 SAGE2P-201ENST00000420011 2126 ntBASIC3.94□□□□□ -1.78
SMARCAL1Q9NZC9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RPL21P132-201ENST00000331267 462 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 SNRPEP3-201ENST00000338402 276 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RNU4-21P-201ENST00000362802 126 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-1122P-201ENST00000384449 107 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RNU1-13P-201ENST00000384499 162 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RNU2-28P-201ENST00000410457 189 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RAB28P1-201ENST00000411517 641 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC008280.1-201ENST00000418851 412 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC092832.1-201ENST00000422934 400 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL049610.1-201ENST00000423374 372 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 MED14P1-201ENST00000430517 648 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RPL36P19-201ENST00000430744 301 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL162151.2-201ENST00000448875 158 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 RPL36AP33-201ENST00000450395 310 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 SNX5P1-201ENST00000505757 1041 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 MTND3P5-201ENST00000512798 333 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 TOMM20P2-201ENST00000540082 421 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC006362.1-201ENST00000567392 174 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 NF1P5-201ENST00000588287 448 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC020914.6-201ENST00000594327 272 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 KLKP1-201ENST00000595979 403 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC106028.5-201ENST00000610332 395 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC013562.2-201ENST00000611632 603 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 AC079228.1-201ENST00000624774 1049 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCAL1Q9NZC9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 RNA5SP391-201ENST00000363456 119 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC007066.1-201ENST00000392902 381 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 DSTNP4-201ENST00000399472 474 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL355379.1-201ENST00000405542 640 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MTCYBP38-201ENST00000417160 1123 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 Z99497.1-201ENST00000421282 135 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC006366.1-201ENST00000422002 759 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL031736.2-201ENST00000426573 787 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL117339.2-201ENST00000430475 180 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 OR4C10P-201ENST00000434991 931 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 LARP1BP3-201ENST00000437229 869 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MTND2P20-201ENST00000440805 661 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 TRIM60P18-201ENST00000441518 828 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC087385.1-201ENST00000475062 312 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC109486.1-201ENST00000486833 374 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms