Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC004987.3-201ENST00000413879 771 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL353777.1-201ENST00000425552 326 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 OR2AH1P-201ENST00000425717 928 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 RPL21P91-201ENST00000429231 479 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 RPEP2-201ENST00000432149 701 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 ELOCP18-201ENST00000434209 337 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 UBE2V1P13-201ENST00000436983 439 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL512326.1-201ENST00000443050 721 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL359893.1-201ENST00000447628 1580 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 RPL29P29-201ENST00000448725 423 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 HMGB1P36-201ENST00000487709 576 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 RPS27AP13-201ENST00000498403 237 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 KCTD9P5-201ENST00000504141 1170 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 SNORA18.6-201ENST00000516792 115 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 DEFB108A-201ENST00000530110 222 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 OR8L1P-201ENST00000534005 955 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC016957.1-201ENST00000534895 309 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 OR8R1P-201ENST00000543943 764 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 TVP23BP1-201ENST00000557500 617 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 VN1R79P-201ENST00000593540 513 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL365503.1-201ENST00000605247 905 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC008966.2-201ENST00000606157 453 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC091304.9-201ENST00000612091 226 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 AC079597.1-201ENST00000624306 508 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC104118.1-201ENST00000607625 1589 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 SPRR2C-201ENST00000290702 219 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 RNU6-97P-201ENST00000363387 104 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 RNU1-63P-201ENST00000383902 164 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 RNU6-339P-201ENST00000384310 107 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 MIR181A1-201ENST00000385026 110 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 MT-TC-201ENST00000387405 66 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 MIR921-201ENST00000401133 56 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 RPS20P2-201ENST00000402520 389 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 PPIAP31-201ENST00000405422 495 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 SPA17P1-201ENST00000416656 452 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 RPS20P32-201ENST00000456044 356 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 RPL21P103-201ENST00000479921 488 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC004924.1-201ENST00000480160 781 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 COX7A2P2-201ENST00000505291 250 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AL592156.1-201ENST00000508758 304 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC011352.1-201ENST00000512300 793 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 CKS1BP3-201ENST00000600888 237 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 DUXAP4-201ENST00000603046 613 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 IMMP1LP1-201ENST00000605170 488 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 OR10AB1P-201ENST00000609613 938 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 FAM27D1-201ENST00000612308 341 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 AC009237.17-201ENST00000618111 748 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 LINC01355-201ENST00000566551 5444 ntBASIC4.92□□□□□ -1.62
VTA1Q9NP79 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VTA1Q9NP79 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VTA1Q9NP79 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.91□□□□□ -1.62
VTA1Q9NP79 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms