Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU2-28P-201ENST00000410457 189 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 HIGD1AP15-201ENST00000416198 280 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC009237.2-201ENST00000421358 284 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 RPL35AP12-201ENST00000425362 338 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC084357.1-201ENST00000473404 255 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC004924.1-201ENST00000480160 781 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC090502.2-201ENST00000549267 280 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC090695.1-201ENST00000561269 1222 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AL132657.2-201ENST00000564417 358 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC138915.2-201ENST00000569776 97 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC104984.5-201ENST00000586878 94 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC006557.5-201ENST00000603126 811 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 MIR6715A-201ENST00000615929 79 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC068722.2-201ENST00000618734 544 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 MIR4727-201ENST00000622232 55 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC026634.1-201ENST00000634369 198 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC009452.1-201ENST00000640823 606 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AL732372.2-225ENST00000642124 456 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 AC107982.1-201ENST00000507171 1300 ntBASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF541Q9H0D2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC090229.1-201ENST00000590983 1609 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 Y_RNA.25-201ENST00000362528 102 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RNU6-560P-201ENST00000364007 108 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 SNORD116.1-201ENST00000365628 92 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 MIR153-1-201ENST00000384914 90 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 MIR513B-201ENST00000385136 84 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 ERHP2-201ENST00000402323 299 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AL023807.1-201ENST00000407932 359 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RNU2-21P-201ENST00000410368 188 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC007899.1-201ENST00000412776 775 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 MTND2P16-201ENST00000419987 799 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 ATP5F1P1-201ENST00000433775 569 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RPL23AP76-201ENST00000441860 458 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC140076.1-201ENST00000449897 361 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RN7SL863P-201ENST00000462370 296 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 OR4G11P-201ENST00000492842 939 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RNU6-1225P-201ENST00000516336 65 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RN7SKP234-201ENST00000517173 224 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RPL12P22-201ENST00000519073 490 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC087276.1-201ENST00000529659 480 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 CENPUP2-201ENST00000555897 1186 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 MIR3945-201ENST00000581853 98 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC022022.2-201ENST00000602989 360 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC073657.2-201ENST00000605661 303 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 RNVU1-4-201ENST00000612985 164 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AC006963.1-201ENST00000624003 1052 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 NMD3P1-201ENST00000439704 1488 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 ZNF33CP-201ENST00000432492 2030 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF541Q9H0D2 CEP170P1-201ENST00000502249 4587 ntBASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 RNVU1-3-201ENST00000364313 161 ntBASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 RNU6-1226P-201ENST00000384317 107 ntBASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF541Q9H0D2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms