Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Y_RNA.638-201ENST00000459374 113 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC103975.1-201ENST00000482506 483 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AP001025.2-201ENST00000490908 477 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 RNU6-491P-201ENST00000516099 110 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 OR4V1P-201ENST00000525394 1140 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 HPRT1P3-201ENST00000539521 576 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC245128.3-201ENST00000594721 748 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 SNRPGP15-201ENST00000600149 222 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 AC104446.1-201ENST00000613728 1321 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 RSL24D1P4-201ENST00000400938 484 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 RNU2-71P-201ENST00000411395 189 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AL592148.1-201ENST00000413568 445 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 MTCO3P4-201ENST00000419236 787 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 RPS15AP40-201ENST00000419621 391 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AC104689.1-201ENST00000473356 768 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 HMGB3P15-201ENST00000507326 574 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 CYCSP39-201ENST00000565821 309 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AC006111.3-201ENST00000622137 383 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 AL645568.2-201ENST00000432815 1337 ntBASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
UPF3BQ9BZI7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 RNU6-335P-201ENST00000364563 113 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 SNORA26.7-201ENST00000391288 122 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 RPS4XP8-201ENST00000402039 771 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 SNORD88.1-201ENST00000408684 91 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 PSMA2P3-201ENST00000429685 675 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 RPL21P2-201ENST00000440049 481 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 Z77249.1-201ENST00000444622 1175 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 MRPL50P4-201ENST00000446432 475 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AL513343.1-201ENST00000451818 792 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 RPS15AP1-201ENST00000457423 391 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 NCOR1P1-202ENST00000486162 291 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC008562.1-201ENST00000521763 330 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AP002770.2-201ENST00000543613 532 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 POLR2KP1-201ENST00000553226 168 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 ZNF861P-201ENST00000588126 639 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC024153.1-201ENST00000603103 365 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC245100.7-201ENST00000609678 442 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 FRG1DP-201ENST00000635586 771 ntBASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.31□□□□□ -1.88
UPF3BQ9BZI7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC123912.3-201ENST00000600907 1367 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 BTBD10P2-201ENST00000404779 676 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AL513043.1-201ENST00000439124 535 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 RPL7P36-201ENST00000444633 681 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 RPL9P33-201ENST00000484311 566 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC083906.5-201ENST00000503722 328 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 SETP12-201ENST00000514068 805 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 COX6CP8-201ENST00000522620 226 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC091544.4-201ENST00000555268 342 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 MIR4319-201ENST00000577285 85 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC069234.5-201ENST00000611056 416 ntBASIC3.3□□□□□ -1.88
UPF3BQ9BZI7 AC131902.3-201ENST00000611767 581 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms