Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 PAICSP4-201ENST00000517543 1253 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC124947.2-202ENST00000552735 133 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC108738.1-201ENST00000603703 237 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC005000.2-201ENST00000605468 310 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 CRYM-AS1-204ENST00000637983 556 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AL354685.2-201ENST00000448218 1447 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 TLK1P1-201ENST00000456760 2440 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL049780.3-201ENST00000624612 1583 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 RNA5SP124-201ENST00000362739 110 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 RNU4-76P-201ENST00000364509 141 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 FGF7P8-201ENST00000402994 292 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL356421.1-201ENST00000403255 413 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL080315.1-201ENST00000406055 466 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC138393.2-201ENST00000414742 246 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC007742.1-201ENST00000425789 329 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 COX6CP13-201ENST00000428703 226 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 ELOCP26-201ENST00000436067 329 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 FDX1P2-201ENST00000450769 375 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL033528.1-201ENST00000453780 140 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC007967.1-201ENST00000455422 1159 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC092989.1-201ENST00000481235 277 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AF131216.2-201ENST00000512316 564 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 RNU6-513P-201ENST00000516104 104 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC022878.1-201ENST00000530684 149 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 GLYCAM1-201ENST00000546596 285 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 SETP2-201ENST00000553886 926 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 HMGB3P26-201ENST00000560051 582 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 HSPE1P5-201ENST00000561489 272 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 RN7SL600P-201ENST00000581811 299 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 MIR548AB-201ENST00000584917 84 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 BNIP3P8-201ENST00000597863 560 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AP000860.1-201ENST00000605250 559 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC009994.1-201ENST00000606889 253 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC007038.2-201ENST00000608095 740 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL442067.2-201ENST00000614033 363 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 Y_RNA.804-201ENST00000615262 101 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AC131238.1-201ENST00000617135 328 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 MAPK10-328ENST00000641553 4009 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 AL022322.2-201ENST00000624072 20397 ntBASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN3Q9BTN0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 AC008033.1-201ENST00000216407 1162 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 RNA5SP258-201ENST00000362750 119 ntBASIC4.66□□□□□ -1.66
LRFN3Q9BTN0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms